Gene DhcVS_763 details

Gene Information

• Locus tag: DhcVS_763
• Symbol: echA
• ID: 8657696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 710336
• End bp: 712282
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 44%
• Product: hydrogenase, EchA subunit
• Protein accession: YP_003330222
• Protein GI: 270308164

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.675229
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCCATTA GTCTTATTGC TATTGCCGTT CTCTTCCCCT TTGCAGCCGG CTTGATTTGT 
CTGTTTCTGA AAAACACCCT TCTCCGGTCT GGGTTTGTTG CCTCCTCTGC TATTGTGCTT 
ATTTCCAGCT CTATTCTGCT GTTTTCACAG GGTGGTTTAC CTATTGAATA CAGCCCCGCC 
CACCAGTGGG ATAGTATTAT TTTGATATTG GATTATGTTT TGCTGGCGTT CTTCTTGTTT 
GTGGGCGTCA AAGATATTAT TAAGAACGGC TGGAGTGCCA GAGGTATTCT AACTTCCGGT 
TTGGTGCTTT CACAGATAAT CCTACTCGGT CTATTTGAGT TTGTTTGGGC ACCTGCCGTT 
CCGCTTTCTT CAGAACCGGC TTTTTTTATT GATCAGCTCT CTATTATCAT GTGCCTTATT 
ATTTCCATTA TCGGTTCGCT TATACTTCTT TACGCAATCA AATATATGAA AGACCATGAG 
CATCACCAGC ACCTAAACGT CACCCGCCAG CCCCATTTCT TTTTCTTCAT GACCATACTG 
CTGGGAGCTA TGAACGGCAT TGTCTTTTCT GATAACCTTC TCTGGATATA CTTTTTCTGG 
GAAATAACTA CTTTATGCTG TTTTGCCCTG ATCGGACATG AACAAACCAA AGAAGCCATA 
AACAATGCTT TCCGGGCATT GTGGATGAAT CTGATAGGCG GTCTAGGTTT TGTGCTGGCT 
ATCATTTATG TCTTTACAAA TTATGACAGC ATCTCCCTGC AAGCCTTGAT AACCAACCCG 
GTTGTGGCCG TGGCACCTCT TTTCTTCCTG TTTATGGCCG CTTTCACCAA AGCAGCCCAG 
GTACCGTTTC AAGGCTGGCT TTTGGGAGCA ATGGTGGCAC CGGTGCCTGT TTCTGCTTTA 
CTTCACTCCT CCACCATGGT CAAAGCGGGC ATTTACCTTT CTATCCGTTT GGCACCGTCT 
ATTACTGATA CTGCTTTGGC TACGTTAATT GCCCTGTTCG GGGCATTTAC TTTTATGGTA 
ACTGCCATTA TGGCCATAAG CCAGCGTGAA TCCAAGAAAG TTTTGGCCTA CTCCACCATT 
TCAAACCTTG GACTGATTAT AATGTGCGTA GGTATAAATA CTCCTTTGGC AATTACTGCT 
GCCATTGTGC TCACCATTTT TCATGCCATA TCTAAAGCGC TGCTCTTTAT GTGTGTAGGC 
GTTATAGACC ACTCTATGGG CAGTCGAGAC ATTGAAGATA TGGAAGGCCT AGTACGCCGT 
TATCCTTTGA TAGCCGGCAT AACAGTTGCC GGTATTCTCT CAATGATGCT GGTGCCTTTT 
GGTATGCTGC TGGGTAAATG GGCTGCCATA GAGGCTACTT CAGCTATGTC AGGGTTTATT 
TCGCCGCTGG TATTCCTGCT GCTGGTTATA GGTTCGGCGG CTACTACCGT TTTCTGGGTA 
AAATGGCTGG GGCGTTTTTT CAGTGTAACA CCTGGAATTG AGAAAATACG TTTTGAACAT 
TTTTCATTTT TATATCACAG CCCTTTACTG ATGTTGCTGG CTTTTGCCGG AGTGTTTAGT 
ATAGGGGTGA TACCCTTCTA TGAAAGCTTT ATTTTACCGG CTGTAACTGC TTTCTATCCG 
AATGTCATTG ACACTTCAAA TGGATTTTTT GGAAGTGCCG CAGGTTTATT TACCGCATGG 
CCGCTGTTTA TCCTGCTCGC CATAGCCATT ATACTGGTGC CGGTTTTATT TAAGCCCAAA 
ACTAAAAACC TCAGCACTGC CTATATGTGC GGTGAAAATG TAAGCACTTC AGCTGACAGT 
TTTTATTCTG TAGCTGACGG TGAAACTAAA CTAAAGCTGG GGTCTATGTA TCTTGACACC 
CAGTTTGCCA ATTCCCATCT GGATACCGGG CTAAAAATAG TTGGCCTTTT GATACTGGTT 
AGTATGCTGG TAGTGGTGCT GATATGA 

 

Protein sequence

MAISLIAIAV LFPFAAGLIC LFLKNTLLRS GFVASSAIVL ISSSILLFSQ GGLPIEYSPA 
HQWDSIILIL DYVLLAFFLF VGVKDIIKNG WSARGILTSG LVLSQIILLG LFEFVWAPAV 
PLSSEPAFFI DQLSIIMCLI ISIIGSLILL YAIKYMKDHE HHQHLNVTRQ PHFFFFMTIL 
LGAMNGIVFS DNLLWIYFFW EITTLCCFAL IGHEQTKEAI NNAFRALWMN LIGGLGFVLA 
IIYVFTNYDS ISLQALITNP VVAVAPLFFL FMAAFTKAAQ VPFQGWLLGA MVAPVPVSAL 
LHSSTMVKAG IYLSIRLAPS ITDTALATLI ALFGAFTFMV TAIMAISQRE SKKVLAYSTI 
SNLGLIIMCV GINTPLAITA AIVLTIFHAI SKALLFMCVG VIDHSMGSRD IEDMEGLVRR 
YPLIAGITVA GILSMMLVPF GMLLGKWAAI EATSAMSGFI SPLVFLLLVI GSAATTVFWV 
KWLGRFFSVT PGIEKIRFEH FSFLYHSPLL MLLAFAGVFS IGVIPFYESF ILPAVTAFYP 
NVIDTSNGFF GSAAGLFTAW PLFILLAIAI ILVPVLFKPK TKNLSTAYMC GENVSTSADS 
FYSVADGETK LKLGSMYLDT QFANSHLDTG LKIVGLLILV SMLVVVLI