| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_742 |
|---|
| Symbol | purD |
|---|
| ID | 8657675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 691439 |
|---|
| End bp | 692557 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | |
|---|
| Product | phosphoribosylamine-glycine ligase |
|---|
| Protein accession | YP_003330202 |
|---|
| Protein GI | 270308144 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTTTCCT TTGCCAAAGA CAAAGCCATT GATATTACCT TTGTAGGACC TGAAGCACCT
CTGGCAGGAG GGGTTGTAGA TGTGTTTGAA TCAGAAGGCC TGCGTATATT CGGCCCCTGC
CGTGAAGCTG CCCAGCTGGA ATCCAGCAAA GTTTTTACCA AAGAGCTGCT TCTTTCAAAT
AAAATTCCCA CTGCTTACAG CCGCAGTTTT TCCAGTTATG AAAAAGCTTG TTCTTATTTG
AGTAGGCTGG ATATGCCGGT TGTGATAAAG GCGGATGGTT TGGCAGGTGG TAAAGGAGTT
ACGGTTGCCC AAACTCATGA GCAGGCTATG GCGGCTTTAT CAGATATAAT GGAGGCCAAA
ATATTCGGTG AAGCCGGTGA ACATGTAGTT ATAGAAGAGT GCATGGTGGG GCAGGAAATG
AGCTTTTTTG CCGTTACTGA CGGTAAAACT GTTGCACCTT TAAGTGCTGC TTGTGATTAT
AAACGGATTT ATGATGGGGA TAAGGGTGCT AATACCGGCG GTATGGGCAG TTATACGCCC
CCTGCTTTTT TTACCCCCGA ATTAAAGGAA GAAATAATGT CCCGCATTCT ATTGCCGGTT
ATAAAGGCAC TGGCTGATCA GGATATCGTA TATAAAGGTG TTTTATATGC CGGTTTGATG
ATAACCGCTG AAGGGCCAAA AGTGATGGAG TTTAATGCCC GCTTTGGAGA CCCCGAAACT
CAGGTTTTAA TGCCCCTGCT CAAGACAGAC TTGCTTGAGA TAGTGGAAGC CACTATTGAA
GGCCGTCTTG ACAAACTCAA TATTGAAATG GAAGATTCAT CTGCAGTCGG GGTTGTGCTG
GCTTCTGGCG GATATCCGGC TGAATACCGT AAAAAATTAC CTGTAAGCGG TCTTTCAGAT
ATACCCTCGG ATATACTTGT TTTCCATGCT GGCACAGTAG CTTCTGAAGA GGGCGAAATA
CTTACTAATG GCGGACGGGT ACTTTGTCTT GTCAGTAAAG GCAAAAATAT AGAGGAAGCC
AGAGACAATG TATATAAAAA TATTGACTGC ATTTCTTTTG AAGATTGCCA TTATCGAAGG
GACATAGCCT TGTTAAACGG GAGGGAACTA TGCCATTAG
|
|---|
| Protein sequence | MLSFAKDKAI DITFVGPEAP LAGGVVDVFE SEGLRIFGPC REAAQLESSK VFTKELLLSN
KIPTAYSRSF SSYEKACSYL SRLDMPVVIK ADGLAGGKGV TVAQTHEQAM AALSDIMEAK
IFGEAGEHVV IEECMVGQEM SFFAVTDGKT VAPLSAACDY KRIYDGDKGA NTGGMGSYTP
PAFFTPELKE EIMSRILLPV IKALADQDIV YKGVLYAGLM ITAEGPKVME FNARFGDPET
QVLMPLLKTD LLEIVEATIE GRLDKLNIEM EDSSAVGVVL ASGGYPAEYR KKLPVSGLSD
IPSDILVFHA GTVASEEGEI LTNGGRVLCL VSKGKNIEEA RDNVYKNIDC ISFEDCHYRR
DIALLNGREL CH
|
|---|
| |