| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_564 |
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| Symbol | nrdJ2 |
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| ID | 8657500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 529904 |
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| End bp | 531703 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | |
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| Product | ribonucleotide reductase, cobalamin-dependent |
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| Protein accession | YP_003330041 |
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| Protein GI | 270307983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTAG AATCCGGCAG ACAATCAGTT GTGATAGCAG CACGTTTATC CACTACCGCC
AAAAGGGTAT TGGAAAAGCG GTATCTCAAA AAAGATGCCG ACGGACGGGT GATTGAAACG
CCGGAGGATA TGTTCCACAG GGTAGCTAGA GTAGTAGCTT CTGCCGAATA TAAATATGCA
CCGGGTGCGG ATATAAGCCG TATTGAAGAG GAATTTTATC AGGCTATGTT CCGCCTGGAG
TTCCTGCCCA ATTCACCCAC CTTATTGAAT GCTGGGCGGC AAGTAGGGCA GCTTTCAGCC
TGTTTTGTTT TGCCAGTAGA AGACTCCATT GAATCTATTT TTGATGCCGT AAAACAGACA
GCTCTTATTC ATAAAAGCGG GGGCGGTACA GGGTTTTCAT TCTCCGACCT GCGTCCTGCC
GGAGATAAGG TTGGGGAACT CACCGAAGTG GCCGGCGGCC CGGTCTCTGT AATTAATATA
TTTGCTGCAG CAGCAGATTA TGTGCGGCAG GGTGGGGTTC GCCGCGGGTG TAACGCCGCT
ATTTTAGATG TAACTCATCC CGATATCCTT AATTTTATCT CCTGCAAGGG TGATCCGAAT
GCCCTGACCA ATTTTTATAT TTCAGTTGTG GTAACCCGAG ACTTCATGAC CAAAGTACGA
AATGGTGAAG ATTACGATAT TATCAACCCG CACACCGGTG AGGTAGTTCA GCGGCTAAAC
GCCGCCTGTG TGTTTGACCG TATTGTGGAC CAGGCTTGGA AAACGGGTGA TCCGGGTTTG
GTATTTATAG ACCGTATAAA TGATGATAAT CCCACTCCGT TATTAGGGCG CATCAAGCAT
GTAAGCGGTT GCGGAGAGCA AACCCTTCTG CCATATGAAT CTTGCAATCT TGGTTCAATC
TCTTTGCCTC GTATGCTCAA GCGTGATGGC GAACGGGTAG TGGTAGACTA TGAAAAGCTG
GGGCGGACAG TTAAAATGGC TATCCGCTTT CTGGATAATG TAATAGATGT AAACAAGTTT
CCTACTCCCG AAATTGAAAA AGCCACGCTG CGTAACCGCA AGGTAGGCTT GGGGGTTATG
GGTTTTGCCG ATATGCTGGT TTTGATGGGT ATACCATACA ATTCCGAAGA GGCTATATTT
CAGGCTGACC AGATAATGGA ATTTATTAAA GAAACTTCCC ACCGTGCTTC GTCAAAACTA
GCCGAAGTCA GAGGGTCTTT CCCTGCTTAT GAAGGCAGTA TTTATGACGT ACCGGGCGGA
CGCCCCATGC GGAATGCCAC TTGTACCAGC ATAGCTCCCA CCGGCACGCT TTCCATTATA
GCCGGGGTAT CTTCGGGTAT AGAACCTTCG TTTGCTATGG TATTTGTTAG GAATATACTT
GATGGTGAAA ACCTGCTGGA GATAAACCCG TATTTTGAAG AAATGGCCAG ACGCGGAGGT
TTCCATTCAA AAGAGCTGTT TGAGAAACTG GTTTCCTCAA ACCACCTGCA TGATATAGAG
TGTATACCGG ACTGGCTTAA ACGTCTGCTG GTTACTGCTC ACCGCATTCG CCCCGAATGG
CATATCCGTA TTCAGGCAGC TTTCCAAAAG TATACTGATC ATGCTGTTTC CAAGACGGTA
AATTTCTCCC ATGAGGCTAC CCGTGAGGAT ATGGCAAATG TGTTTAATAT GGCCTATGAC
AAGGGGCTTA AAGGGATAAC AGTATACCGT GACGGAAGCC GGGCAGCTCA GCCTTTATGC
ACCTGTGAAT CAGGTGTAAA GCTGGTAGAC CAGTATCTGG ATAACTGCTC CTGCCGTTAG
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| Protein sequence | MTVESGRQSV VIAARLSTTA KRVLEKRYLK KDADGRVIET PEDMFHRVAR VVASAEYKYA
PGADISRIEE EFYQAMFRLE FLPNSPTLLN AGRQVGQLSA CFVLPVEDSI ESIFDAVKQT
ALIHKSGGGT GFSFSDLRPA GDKVGELTEV AGGPVSVINI FAAAADYVRQ GGVRRGCNAA
ILDVTHPDIL NFISCKGDPN ALTNFYISVV VTRDFMTKVR NGEDYDIINP HTGEVVQRLN
AACVFDRIVD QAWKTGDPGL VFIDRINDDN PTPLLGRIKH VSGCGEQTLL PYESCNLGSI
SLPRMLKRDG ERVVVDYEKL GRTVKMAIRF LDNVIDVNKF PTPEIEKATL RNRKVGLGVM
GFADMLVLMG IPYNSEEAIF QADQIMEFIK ETSHRASSKL AEVRGSFPAY EGSIYDVPGG
RPMRNATCTS IAPTGTLSII AGVSSGIEPS FAMVFVRNIL DGENLLEINP YFEEMARRGG
FHSKELFEKL VSSNHLHDIE CIPDWLKRLL VTAHRIRPEW HIRIQAAFQK YTDHAVSKTV
NFSHEATRED MANVFNMAYD KGLKGITVYR DGSRAAQPLC TCESGVKLVD QYLDNCSCR
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