Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_393 |
Symbol | mdh |
ID | 8657335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 382398 |
End bp | 383324 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | malate dehydrogenase, NAD-dependent |
Protein accession | YP_003329877 |
Protein GI | 270307819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.871516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCAAAA TTAGTGTTAT AGGTGCCGGC AATGTGGGTG CAACACTTGC CCAGCGCCTT ATAGAAAAAG ACTTTGCAGA CGTGGTCATG CTGGACGTGG TGGAGGGTAT TCCCCAGGGC AAGGCTCTGG ATATTTCCCA GTCTGCCAAT GTGCTTGGTT TCAGCCATAC CATTACCGGC AGCAATGATT ATGCCGAAAC AGCCGGCTCT GAAATAGTGG TGATAACCGC CGGTATTGCC CGCAAACCGG GCATGACCCG TGAGGAACTG CTGGCTATAA ACCAGAAGAT TATGACCGAT GTGGTTTCAA ACTGCCTTAA ATACTCCCCC GAAGCCACCC TGGTGGTCGT CTCCAACCCG GTGGATACCA TGACCTATCT GGCTTGGAAA CTTTCAGGCC TGCCCCGGAA ACGGGTGGTG GGTCTTTCCG GCGTGCTGGA CGGAGGGCGT CTGGCTACCT TTGTAGCCCG TGAGCTTGGG GTAAAACCTT CGGCTGTTAC ACCCTGCGTA ATGGGCGAAC ACGGCGGCAG CATGGTGGTC ATGCCCCGTT TTACACTGGT GAACGGCAAA CCCCTGTCCG AACTGGTTTC GGCTGAAAAA GCAGATGAAC TGGCCAAACG GGCAGTTAAC GGCGGTGCCG AGATAGTGGC TTTCCTTAAA ACCGGCAGCG CTTTTTATGC CCCGTCTGCT TCAGTAGCTA CTATGGTAGA GGCTATTTTT ACGGGCAGCG GAAAGGTTAT GAACTGTGCC GCGGTGCTGG ACGGAGAATA CGGCCTGAAA AATATTGTGC TTGGCGTGCC GGTAAAGCTG GGTAAAGGTG GCATACAGGA AATTATTACC TTGCCGTTAG ATAAGATGGA AAATGCCAGC CTGTTGGCTT CTGCCGAAGT GGTAAAGGGA CAGATAGCCG CACTTTCGCT TAAATAG
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Protein sequence | MPKISVIGAG NVGATLAQRL IEKDFADVVM LDVVEGIPQG KALDISQSAN VLGFSHTITG SNDYAETAGS EIVVITAGIA RKPGMTREEL LAINQKIMTD VVSNCLKYSP EATLVVVSNP VDTMTYLAWK LSGLPRKRVV GLSGVLDGGR LATFVARELG VKPSAVTPCV MGEHGGSMVV MPRFTLVNGK PLSELVSAEK ADELAKRAVN GGAEIVAFLK TGSAFYAPSA SVATMVEAIF TGSGKVMNCA AVLDGEYGLK NIVLGVPVKL GKGGIQEIIT LPLDKMENAS LLASAEVVKG QIAALSLK
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