| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_391 |
|---|
| Symbol | |
|---|
| ID | 8657333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 380724 |
|---|
| End bp | 381227 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | aconitase/homoaconitase C-terminal domain protein, 3-isopropylmalate dehydratase small subunit |
|---|
| Protein accession | YP_003329875 |
|---|
| Protein GI | 270307817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAGG GCAAAGTTTT TAAGTTTGGT GATAGCATAT CCACTGACCA TATTGCGCCC
GGCCGTCTGG TGCATCTGCG GAGCAATCTG CCGGAACTGG CCAAGCACGT GCTGGAAGAT
GCAGATCCCA CTTTTGCCCA GAAGGTAAAA CCGGGTGATT TTGTGGTAGC TGGCAACAAC
TTCGGCTTGG GTTCTTCGCG TGAACACGCC CCGCTGATTA TTAAAATGTC CGGAGTGAGT
GCAGTACTGG CAAAGTCGGT AGCCCGCATT TTCTTCCGCA ACGCCATAAA TCTGGGTCTG
CCCGTACTTA TATGTGATAC CGATAAAATT GCCGAAGGGG ATGAACTGGA AGTAGACCTT
AAGGGCGGCA AAATATATGA CCGTACTAAC GGAGCAGAGC TGACATTTGG CAAGATACCT
CCCGCCATGC TGAAGATACT TGATGAGGGC GGTGTCATGC CCTATATAAA GAAATACGGT
GATTTCAAGC TTAACGAAGT TTAA
|
|---|
| Protein sequence | MLKGKVFKFG DSISTDHIAP GRLVHLRSNL PELAKHVLED ADPTFAQKVK PGDFVVAGNN
FGLGSSREHA PLIIKMSGVS AVLAKSVARI FFRNAINLGL PVLICDTDKI AEGDELEVDL
KGGKIYDRTN GAELTFGKIP PAMLKILDEG GVMPYIKKYG DFKLNEV
|
|---|
| |