Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_341 |
Symbol | |
ID | 8657283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 331862 |
End bp | 332638 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | |
Product | ubiquinone/menaquinone biosynthesis methlytransferase |
Protein accession | YP_003329826 |
Protein GI | 270307768 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0000011766 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTAGTT TGGCCGAAGC GCCTATCCAG GATCCCGGAT TTGACTCTGA AGAGGCGCAT AAACGTAAAC AGTACATGGT TGACTTGTTC GTAGTTCAAG CGAAAAACTA TGATTTCCAC GATGATGTCT TCGGGCTTTA TGCCCACCGT TTTTGGATGC GGACTGTTCT TAAGATTGTC GGTAAGTTTG TGAAAGGCCG CACCAGTACC AAAATGCTTG ATTTGGCTTG CGGCACCGGC TTTGTTACCT TCAATACGGC CCGGAACTTC GAAAACATTG ATATAGACTC CTTTGATATC AGCCCCGATA TGCTGGCGGT TGCCAAGGAG CGTTACGAAA AGTATTTCAA AGGGCGGAGT ATAAAATTCT GGCAGGGTGA TGCCGAAGTC CCCTTTGGCG AAGAGAAATA CAATTTGATA ACCACCAGTT TCGCTTACCG CAACTTTGCC AACAAAGGGC TGGCTACCGA GAATGTTTTC CGTGCCTTGA AACCGGGCGG TCTCTTTATT ATTCAGGACC TTACCAAACC CGAACACCAC CCCATGCGCG GACTGTATAT ATTCTATATG AAGTATATTT TGCCTTTGTT TACCAGTATT TTGGGTACCG AAAAATCGGC TGCCCGCTGG CTTTATAAAT CTGCTATGAT GATGCCCACT AACGGGCAAA TTGTAAAACT CATGGAAAGC AAAGGCTTTG AAAAATGCCA GTATAAGAGC TTGTCACTGG GTATTGCCTG CGTAATCTGG GGCTATAAAC CGGAGAAATC AGAATAA
|
Protein sequence | MSSLAEAPIQ DPGFDSEEAH KRKQYMVDLF VVQAKNYDFH DDVFGLYAHR FWMRTVLKIV GKFVKGRTST KMLDLACGTG FVTFNTARNF ENIDIDSFDI SPDMLAVAKE RYEKYFKGRS IKFWQGDAEV PFGEEKYNLI TTSFAYRNFA NKGLATENVF RALKPGGLFI IQDLTKPEHH PMRGLYIFYM KYILPLFTSI LGTEKSAARW LYKSAMMMPT NGQIVKLMES KGFEKCQYKS LSLGIACVIW GYKPEKSE
|
| |