| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_255 |
|---|
| Symbol | |
|---|
| ID | 8657199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | - |
|---|
| Start bp | 239687 |
|---|
| End bp | 240103 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | Vsr domain protein T:G mismatch repair endonuclease |
|---|
| Protein accession | YP_003329745 |
|---|
| Protein GI | 270307687 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0112407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATA ACTTAACACC GGAACAGCGT AGCTATTGCA TGTCCCGCAT CAAGGGGAAA
GATACCGGTT TGGAAATGCG AGTGCGGTCA GCACTTCATG AACAAGGTCT AAGATTCAGA
AAGAATGTCA AATGGCTGCC AGGTAAACCT GATATCGTTT TCAGCAAAGC AAAAGTCGCT
GTCTTTGTGG ATGGCGACTT CTGGCACGGA TATCGATTCC CCTTATGGCA AAACAAAGTT
TCTGACTTTT GGAAAAAGAA GATATCTAAG AATCGGGAGA GGGACATTAA AAATCACCGC
AAACTTCGCC GGATGGGATG GACCGTGATC CGTCTTTGGC AACACGAAAT CCAAAAGAAT
TTTGAAGCCA GTATTGAGCG GATATTAGCA ACAGCCCTAA GCAAAAAAAG GGGGTGA
|
|---|
| Protein sequence | MPDNLTPEQR SYCMSRIKGK DTGLEMRVRS ALHEQGLRFR KNVKWLPGKP DIVFSKAKVA
VFVDGDFWHG YRFPLWQNKV SDFWKKKISK NRERDIKNHR KLRRMGWTVI RLWQHEIQKN
FEASIERILA TALSKKRG
|
|---|
| |