| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_232 |
|---|
| Symbol | |
|---|
| ID | 8657176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. VS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013552 |
|---|
| Strand | + |
|---|
| Start bp | 221262 |
|---|
| End bp | 222479 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003329722 |
|---|
| Protein GI | 270307664 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTAT TGATTCCAAT ACGGTCTTTA TCGCCGGATA GCTCAAATTA TCCAGCGGGT
ATCCACAAAG GACACCCTGC CGGTCTTCCT GCGATAGACC CTGACCTGCT GCCGGATAAT
ATCAAATGGA ATACGACCAT TTTCGGCGTC TTGGGCAGCA TGGTTATCTG GCAAGCTCAA
GCCAAACCGC TTCTGAGTAT CCCAATTCCG ATCATCCAAT CCTCGATTAT TGTGACCGCC
AGTGAGGCAA AAACCGCTAG TCCCGGATTA GTGTGCCCGG TCCCTGTAAT TGTACCGGCT
ACCGCTCTGG CTACCGTTAG CGATCCGGAG AGAACGGTCC TCCATGATGA TGCTCCTCCT
ACCGACACCG AAGTCACCAC CGAAGCCAAC AGCGATCCGG TAATAGATCA ATCCTGGCTT
CAAAATGACG ACAACCAGGA GGCGGTTACT ACAACCACCT GGAAAGCTAT GACTTTTACT
CCGGCCACCA ATCATACCAT CCGCGGTGTA AGGCTGGCTC TCTATGGGTC GAGCGTCGGG
TCAATTACTG TTTCAATCCG TGCTACATCC GGAGGTTTGC CTACAGGAGG TGATCTTTGT
AGCGGGCCCC TGGATGGATC TCAACTTAAC GGAACCTTTG ATGGAAAGGT CTACGACATA
TCTCTTGGAG TCGGGACCGC TTTAACGGCC GGGACCGTTT ACGCCATTGT CGTCCGTACA
GGTTCTGGAA CTCTAAACTG GCGATCTTCG GCGGCCGGTT ATGATCGGGG GAATAAGTGT
AGTTCCACCA ACTCCGGAGG ATCCTGGACC ACTGACGCCA CCAGAGAATT GTTGTTTCAA
GAGTTTGGAG ATAACTCCCT GGACGTACCC GCTACGCCTA GTCCAACAGC AGTTGGAGAT
GGTCTCTATA TCGGCAATAG CACTCCCTTC GATTATGTGG ATGTGTGGGT AAATCAAGCT
GGAGTCGGGA CTTACACAAT CACCTGGAAA TATTATAACG GCGTCTCCTG GCTACCTCTG
ACGCTAAGTA GCGATGGAGA TAGATCCAAT AGCTGGAAGC GTCCTGGCAG ACACACGGTA
TTTTTTAATC GGCCTGTGGA TTGGGCTATA ACCTCAATTC TGACCTATGC CCTCTATTGG
GTTAAAGCCG AGGTGACGGC TTACACCAGT CAAGCCACTC AGCCTATTTT AGGCCGGGTC
TGGATCGGGG CGTACTAA
|
|---|
| Protein sequence | MGLLIPIRSL SPDSSNYPAG IHKGHPAGLP AIDPDLLPDN IKWNTTIFGV LGSMVIWQAQ
AKPLLSIPIP IIQSSIIVTA SEAKTASPGL VCPVPVIVPA TALATVSDPE RTVLHDDAPP
TDTEVTTEAN SDPVIDQSWL QNDDNQEAVT TTTWKAMTFT PATNHTIRGV RLALYGSSVG
SITVSIRATS GGLPTGGDLC SGPLDGSQLN GTFDGKVYDI SLGVGTALTA GTVYAIVVRT
GSGTLNWRSS AAGYDRGNKC SSTNSGGSWT TDATRELLFQ EFGDNSLDVP ATPSPTAVGD
GLYIGNSTPF DYVDVWVNQA GVGTYTITWK YYNGVSWLPL TLSSDGDRSN SWKRPGRHTV
FFNRPVDWAI TSILTYALYW VKAEVTAYTS QATQPILGRV WIGAY
|
|---|
| |