| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1452 |
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| Symbol | hycD |
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| ID | 8658377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | - |
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| Start bp | 1351901 |
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| End bp | 1352851 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | hydrogenase, HycD subunit |
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| Protein accession | YP_003330878 |
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| Protein GI | 270308820 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCTGTGG TGAGCTTAAA TCTGGTGTTA TACGGTTTTA TAAACACAGC CTTGGCACTG
CTGGTATCAC CGCTATTTAT CAGCCTTATT AAAAAGGTTA AGGCTTATGC CCAGGGACGG
GTGGGGCCGC CCCTTTTACA GACCTATTAC CAGTTGTACA AGCTTTTCAA GAAGGAAAGG
GTTTATTCCT ATCAGACCTC ATTCATAATC CGCCTTACCC CATACCTGAG TCTGGCATTT
ATGATGGTGG CGTCTCTGTC TGTGCCTCTG GTCTTTATAC CTGCGGCAGA CCCCGGTCTG
GGCAATATCA TCTTGTTTTT ATACCTCATG GTTATGTCCC GCTTTTTCAT GGCGCTTTCG
GGGCTGGATG CCGGCAGCAG TTTCGGCGGT ATGGGCAGTT CACGGGAGAT GACTCTTGCC
GCCATTATAG AGCCGGTGAT TATTATCGTA TTCGGGGCGC TGGCATATGT GCTTCAGACA
ACCAGCCTGT TTGATATGTT CGCTCAGGTG CGGAAAAGCA GTTTCCTGTC CAATCCCAGC
CTGATACTTA CCGGTATTTC TCTATTTATA ATCCTTATTG TAGAAACCTC CCGTATACCG
GTAGACAACC CTGAAACCCA TCTGGAACTG ACTATGATAC ATGAAGCCAT GACGTTGGAA
TACTCCGGGC CGGATTTGGC ACTGATAGAG CTTTCACATG CCCTTAAGCA AACCCTGCTG
ATGGGGGTGC TTTTAAATAT TATAGCTCCC TGGGGGTTGG CATCGGCACC TGCGGCAGGC
GGGATAGCAG TAGCATTTCT GGCTTTTGTG ATAAAGGGCA GTCTGCTTGC GGTGGGAGTG
GGTATATTTG AATCCCTTAT GGCAAAATTC CGCCTTTTCA GGGTGCCGGG GCTTTTTATG
TTGGCCTTTT TCTTTTCATT TATCACCGTA CTATTCAAGT TTTTGGCGTA G
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| Protein sequence | MAVVSLNLVL YGFINTALAL LVSPLFISLI KKVKAYAQGR VGPPLLQTYY QLYKLFKKER
VYSYQTSFII RLTPYLSLAF MMVASLSVPL VFIPAADPGL GNIILFLYLM VMSRFFMALS
GLDAGSSFGG MGSSREMTLA AIIEPVIIIV FGALAYVLQT TSLFDMFAQV RKSSFLSNPS
LILTGISLFI ILIVETSRIP VDNPETHLEL TMIHEAMTLE YSGPDLALIE LSHALKQTLL
MGVLLNIIAP WGLASAPAAG GIAVAFLAFV IKGSLLAVGV GIFESLMAKF RLFRVPGLFM
LAFFFSFITV LFKFLA
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