Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1445 |
Symbol | |
ID | 8658370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 1345541 |
End bp | 1346584 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003330871 |
Protein GI | 270308813 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000261695 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTGATGT CTGAAAAAGT AACATGGAAA AACAAATTGC GGGCAGACCC TATTCCTTGG TTACTGGAAA CAGATTTATC CCAGCCGGCA GTCCGTTACT TTACCCTCAG GGATATTATC GGCTGCGGGC AAAATGACGC TGCGCTGAAA GAAGCTAAGG CCTCCATTAT GTTAAGCGGG CCTGTTCCCT CTATACTGGC TGCCCAGTCC TCTGAAGGGT ACTGGCTGCA CCCCGGTGCG GGTTATTCAC CCAAATACCA GAGTACTGTC TGGCAGATTG TTTTTCTGGC CCAGCTGGGG GCAGATAAAT CTGATGGCAG GGTAAAAAAA GGTTGCAATT ACCTGTTTGA ATATAACCAG TCCAAGGCCG GTTGGTTTTC TTATAACGGC ACTCCTTCAG GTTTTATTCA CTGTCTGGCG GGCAACCTTG AAGCGGCTCT GATAGATTTG GGGTGGCTGG AAGATGAACG TCTGCAAACT GCCATTGAAA AACATGCCAG ATTTATTACC GGGGATGGCA TGGCAGATTC CGCGGCTGCG GGTGTAACAG ACCGCTATTA TGCTTATACT CCCGGGCCAA TGTTCAACTG CGGTCCTAAT GGAGGATTGC CTTGCGGCTG GGGGGCTGTA AAGTCACTCA ACGCCCTTAG CAGAGTCCCT CCGTCAAAAC GTACCCCGGC TGTAATACGG GCACTGGACC GAGGCTTGGA TTTCCTGTTC AGGTACAACC CTGCGGCGGC GGATTACCCC TTTGGCACCG GCAGCAGACC AAGTTCCAGT TGGTTTAGTT TCGGTTATCC CTTGGGTTAT GCAGCTGATA TCCTGCAAAC GCTGGATGTA TTGTCCGCTC TGGGTTATGC CCGTGACCCC CGCTTGGCTG AAGCCATAGA TTTGGTGCTT TCCAAGCAAG ACCCCAAAGG ACGCTGGCCT ATGGAATGCC GCTTTACCGG CAAAACTTGG ATGGACATAG AAAAAAACAG ACATTCCAGC AAGTGGATTA CCCTGCGGGC TCTCAGGGTT TTGAAAGCGG CTTTTCCAGA GTAA
|
Protein sequence | MLMSEKVTWK NKLRADPIPW LLETDLSQPA VRYFTLRDII GCGQNDAALK EAKASIMLSG PVPSILAAQS SEGYWLHPGA GYSPKYQSTV WQIVFLAQLG ADKSDGRVKK GCNYLFEYNQ SKAGWFSYNG TPSGFIHCLA GNLEAALIDL GWLEDERLQT AIEKHARFIT GDGMADSAAA GVTDRYYAYT PGPMFNCGPN GGLPCGWGAV KSLNALSRVP PSKRTPAVIR ALDRGLDFLF RYNPAAADYP FGTGSRPSSS WFSFGYPLGY AADILQTLDV LSALGYARDP RLAEAIDLVL SKQDPKGRWP MECRFTGKTW MDIEKNRHSS KWITLRALRV LKAAFPE
|
| |