Gene DhcVS_1416 details

Gene Information

• Locus tag: DhcVS_1416
• ID: 8658341
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: +
• Start bp: 1314400
• End bp: 1316346
• Gene Length: 1947 bp
• Protein Length: 648 aa
• Translation table: 11
• GC content: 52%
• Product: ABC-transporter protein
• Protein accession: YP_003330843
• Protein GI: 270308785

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.198119
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACACA GCTATTATTC CCGTATAAAT GGCAATTCCC CTGATGAGAA GCCCAAAATC 
ACCCGCGGCT TACTGAAAAG GGTCTGGAGT TATGCCCGCC CTTACCGCTG GCTGGTGCTC 
TGGATGCTGG TACTCACTCT GGCCACTACC GGCCTGGGGC TTCTGACCCC TTTGATACTG 
CGTGACCTGA TAGATATCAC TCTGCCGGAC AAGAATATAA GCCGCCTAAG CTGGCTGATT 
GCAGCCCTGC TGACGATACC CCTTCTGACA AGTTTCTTAA ACGTGGTATT ACGCAGATAT 
AACTCAAGGG TAGGTGAAGG GGTAATATCC GACCTCAGGC TGGCTATGTT TTCGCACCTG 
CAGCGCATGT CACTCAGCTT TTTTACCCAC ACCAAAAGCG GCGAACTGAT GAGCCGCCTT 
AATAACGACG TTATCGGTGC CCAAACGGCT ATCAGCAATA CTTTTGTATC TATAGTAACC 
AGCCTGATTC AGGCCATAGT GGTATTTTCA GTTATGATTA CCCTGGAATG GCGGCTGGCA 
CTGATAAGCG TGGCTATACT GCCCCTTTTC TTCTGGGCGG CCCAGCACCT GGGAAACAGG 
CTTCGGGATA TTGCCCGGAA CCAGCTGGAC CAAAATGCCA GAATGAATGC CGTTGCCCAG 
GAACTGCTTA ACATAAGCGG GTCTTTGCTG GTCAAACTTT TCGGCCGTTC GGCGGAAGAA 
GACCGCCGTT TCAAAGAACG CTCTGACGAA GTAAAAAATA TTGGTATAAA GCGGGCGGTG 
ACTGGCTCAC TCTTTTTTGC CAGTATAGGC CTTCTAAGCG CTATTGGCAT AGCCCTGGTT 
TACGGGGTGG GGGGCTATTT TGTAATTCAG GAAACCCTGA CTATAGGTAC TATCGTAGCT 
TTGGGTGCTT TACTGACTAC CCTGTACGGG GCTTTGCAGA CCCTGACGAA CACCCCGGTG 
GATTTTGCCA CCTCTATGGT TAGTTTTGAA CGGGTTTTTG AAGTGCTGGA CGTACCGCTT 
GATATTGAAG AGAAAGAAAA TGCCTGCATT TTAGGCAATG TAAGCGGCGT TTTGGAATTT 
AAGAATGTAG TCTTTCATTA TGAACGCGAA GAAAAAGGCC TGCTTAGAGA AGTGCGGCGT 
TTCGGACAGA TGCAGGACGT AGTTTCGGTG CTCTCCGGGG CTGACGGAAC ACCTAAAAAC 
GGCGGCGGAA AAAATCCAGA CAGCGCCGGA CAGGCAAACG GCGAGGTGCT GGAAAATATT 
TCGTTCAGAG CCGAACCCGG CCAGTTGGTG GCTTTGGTCG GACCAAGCGG TGCCGGCAAA 
ACAACCCTTA CTTATCTTAT ACCCCGTTTA TATGACCCGG TTGCCGGGCA AATACTGATA 
GACGGGCATG ACTTAAGAGA TGTCACCCTT GATTCACTGG CCGCCCAGAT AGGTATGGTC 
ACCCAGGAAA CTTATCTTTT CCATGATACG GTGCGCACCA ACCTGCTGTA CGGCCGGCCG 
GATGCCACCC AGGCGGAAGT GGAAGCGGCG GCTAAAGCGG CCAATATCCA CAAGTTTATA 
AAAAGTCTGC CCCAGGGTTA TGAAACCATT GTGGGGGAGC GCGGCTACCG GCTGAGCGGG 
GGCGAAAAAC AGAGGCTGGC ACTGGCCCGG GTTATCCTTA AAAACCCGCG GATACTGGTG 
CTGGATGAAG CCACCAGCTC ACTGGACAGC CAGTCGGAAT ACCTTATTCA GGAAGCATTA 
AAACACGTGA TGGTGGGACG TACCAGCATT GTTATTGCCC ACCGCCTGAG CACTATTCTG 
GCAGCGGATA TGATACTGGT GATGGACCAT GGGCATATTG TGGAAAGGGG CACTCACCGC 
GAGCTGCTGG CCCTAGGCGG GCTGTATGCA AATCTCTATG AAACCCAGTT TCGCAGCAAG 
GCCAATACCC CCTCAGCGGC GGAGTAA 

 

Protein sequence

MIHSYYSRIN GNSPDEKPKI TRGLLKRVWS YARPYRWLVL WMLVLTLATT GLGLLTPLIL 
RDLIDITLPD KNISRLSWLI AALLTIPLLT SFLNVVLRRY NSRVGEGVIS DLRLAMFSHL 
QRMSLSFFTH TKSGELMSRL NNDVIGAQTA ISNTFVSIVT SLIQAIVVFS VMITLEWRLA 
LISVAILPLF FWAAQHLGNR LRDIARNQLD QNARMNAVAQ ELLNISGSLL VKLFGRSAEE 
DRRFKERSDE VKNIGIKRAV TGSLFFASIG LLSAIGIALV YGVGGYFVIQ ETLTIGTIVA 
LGALLTTLYG ALQTLTNTPV DFATSMVSFE RVFEVLDVPL DIEEKENACI LGNVSGVLEF 
KNVVFHYERE EKGLLREVRR FGQMQDVVSV LSGADGTPKN GGGKNPDSAG QANGEVLENI 
SFRAEPGQLV ALVGPSGAGK TTLTYLIPRL YDPVAGQILI DGHDLRDVTL DSLAAQIGMV 
TQETYLFHDT VRTNLLYGRP DATQAEVEAA AKAANIHKFI KSLPQGYETI VGERGYRLSG 
GEKQRLALAR VILKNPRILV LDEATSSLDS QSEYLIQEAL KHVMVGRTSI VIAHRLSTIL 
AADMILVMDH GHIVERGTHR ELLALGGLYA NLYETQFRSK ANTPSAAE