Gene DhcVS_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1380 
SymbolrdhD 
ID8658305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand- 
Start bp1277183 
End bp1277875 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content43% 
IMG OID 
ProductDNA binding response regulator 
Protein accessionYP_003330807 
Protein GI270308749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TAATAATATG TGACGATCCG CAAGTCTTAA AAGACCTGGT GTTGTGCCTC 
AAAATCCGTT ACCAAAATCT GGAATACGCC GTATCTGACA ATATCAGCGA AGGGATAGGT 
TTGATAGAGA CTTTGTCACC GGACCTGATT GTGCTGGATT CCTGTCTATT AAATTCGGCT 
GCCCCAAATA TCCTTGTCAG TATCCGCGAA TTTTCTGATA TACCCATTAT TATTCTTAAT 
GCTATCGGTG AGGTTGGCAA TAAAGTTCAG TTTTTGGAAG ACGGGGCAGA TGAATGCATA 
GAAAAGCCGA TTAATGGTAT AGAGTGTCAG GCGGTTACTC ATGCGCTCTT GCGGCGTAAT 
ATGAATTTGG GCTTCAAGGC CGAGAGTACC ATACCTATCA GCAACGGCTT GGAAGTCAAT 
TTTAACAGGC GGGAGCTTAC TATGTTCGGT TCACCTGTTC ATCTGACACC TATTGAATTT 
AGTCTGCTGG CTTTACTTGC AAGAAACAGC GGACAAGTGC TTACCTACAG GATATTGCTT 
GAGAAGGTGT GGGGCACGGA ATACAGCGGG GATCTCAACC TTTTAAAGAA GCATATTCAT 
AATCTGAGAG CCAAGATAGA AGTAAATCCG GAGTATCCCA GGATAATTAT TACCGAAAGA 
GGGTTAGGCT ACAGCCTGAT AAGGCAATTC TAA
 
Protein sequence
MKILIICDDP QVLKDLVLCL KIRYQNLEYA VSDNISEGIG LIETLSPDLI VLDSCLLNSA 
APNILVSIRE FSDIPIIILN AIGEVGNKVQ FLEDGADECI EKPINGIECQ AVTHALLRRN 
MNLGFKAEST IPISNGLEVN FNRRELTMFG SPVHLTPIEF SLLALLARNS GQVLTYRILL 
EKVWGTEYSG DLNLLKKHIH NLRAKIEVNP EYPRIIITER GLGYSLIRQF