| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1280 |
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| Symbol | smpB |
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| ID | 8658206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1177022 |
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| End bp | 1177486 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | ssrA binding protein (smpB) |
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| Protein accession | YP_003330709 |
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| Protein GI | 270308651 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000661775 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGAAT ACGTAACCCT GACAACTAAC CGCAAAGCAT TTCATAACTA TTTCCTGGAA
GAAAAATACG AAGCAGGGAT AGTACTGCTG GGTACGGAGA TAAAATCCCT CCGGGGCGGC
AGAGTAAATA TGGGAGATGC CTACGTTAAA CCTCAGGGGG GAGAGCTCTG GCTGGTAAAC
GCCCACATAT CAGCTTACCA GTGCAGCGGA CATACCAGCC ATGAACCTTT GAGGGAACGC
AAACTGCTTA TGCACCGCAA AGAAATAGCC CTGCTTATGT CAAAGGTCAA GGAAAAAGGG
CTGACTCTGG TACCGGTCCG GATATACCTT AAAAACGATA TTGCCAAGGT AGAGCTATCA
CTGGGGCGGG GTAAAAAGCT GTATGACAAA CGGGATACCA TTACCAAGCG GGATACCGAG
CGTGAACTGG AGCGGGAAAT AAAACACCGC AATTTCCGCC GTTAA
|
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| Protein sequence | MAEYVTLTTN RKAFHNYFLE EKYEAGIVLL GTEIKSLRGG RVNMGDAYVK PQGGELWLVN
AHISAYQCSG HTSHEPLRER KLLMHRKEIA LLMSKVKEKG LTLVPVRIYL KNDIAKVELS
LGRGKKLYDK RDTITKRDTE RELEREIKHR NFRR
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