Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1256 |
Symbol | |
ID | 8658183 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1155231 |
End bp | 1156253 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
Protein accession | YP_003330686 |
Protein GI | 270308628 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTAGTAA TAATGAAAAA TGACGCCACA GAGGCACAGA TAGCTAATGT TATGAAGGAG ATTACCAATG CAGGCTACCG GGGTATACCC ATACCGGGTG ACCACCGGAC TGCTGTCTGC ATAGTAGGCA ACCAGGGCAT GGTAGAGGAA AACCCCTTTC TGGCACTGGA AGGGGTCAAG GAAGTGCTCA GGGTAACCAA GCCCTATAAA CTGGTCAGCC GGGAAACCTG CCCCGAACCC ACCGTTATCC GTCTGGGAGA TGTGGAAATA GGAAACGGGT GCAAACCGGT TATAATAGCC GGGCCTTGCT CGGTGGAGAG CGAAGAACAA ACCCTCCGCA TAGCCCGTCA GGTAAAAGAG GGCGGTGCCA AGCTCTTCAG AGGGGGGGCA TTCAAGCCCC GCACTTCACC CTACAGCTTT CAGGGTTTGG GTAAAGCCGG CCTCAAGATA CTTGAAAAAG TACACTCTGA AACCGGCCTC TTTATTGTCA CCGAAGCTAC AGACTCTGAA AACCTGAAAC TGGTTGAAGA CAGCACAGAT ATTATCCAGA TAGGTGCCCG CAATATGCAG AATTATTCCC TGCTGCGGCG GGCAGGCCAG ACAAAAAAAC CGGTTATCTT AAAGCGGGGG CTGTCAGCCA CCATTGAAGA ACTGCTGATG GCCGCCGAAT ACATTATGGC CGAAGGCAAC ACCCAGGTAA TATTGTGTGA ACGGGGTATC CGCACCTTTT CAGACAACAC CCGCTTTACG CTGGACCTGA GTGCCATTCT GTCTGTAAAG GCCGTAAGCC ATCTGCCAAT AATAGTAGAC CCCAGCCATG CGGCCGGACG CCGTGATTAC GTTATCCCCC TGTCCAGAGC CGCCATTGCG GCCGGGGCAG ACGGGCTGAT AGTGGAAGTC CATTCAGACC CCGCTGCCGC CCTGTCTGAC GGGGCGCAGT CTTTATATCC GGAACAGTTC AACCGGCTGG CAAAAGAAGT GGAGTATTTA AATATGCTGG GAGTAGAAAA ATGCCTGAAG TAA
|
Protein sequence | MLVIMKNDAT EAQIANVMKE ITNAGYRGIP IPGDHRTAVC IVGNQGMVEE NPFLALEGVK EVLRVTKPYK LVSRETCPEP TVIRLGDVEI GNGCKPVIIA GPCSVESEEQ TLRIARQVKE GGAKLFRGGA FKPRTSPYSF QGLGKAGLKI LEKVHSETGL FIVTEATDSE NLKLVEDSTD IIQIGARNMQ NYSLLRRAGQ TKKPVILKRG LSATIEELLM AAEYIMAEGN TQVILCERGI RTFSDNTRFT LDLSAILSVK AVSHLPIIVD PSHAAGRRDY VIPLSRAAIA AGADGLIVEV HSDPAAALSD GAQSLYPEQF NRLAKEVEYL NMLGVEKCLK
|
| |