Gene DhcVS_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhcVS_1256 
Symbol 
ID8658183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. VS 
KingdomBacteria 
Replicon accessionNC_013552 
Strand
Start bp1155231 
End bp1156253 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content53% 
IMG OID 
Product3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
Protein accessionYP_003330686 
Protein GI270308628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAA TAATGAAAAA TGACGCCACA GAGGCACAGA TAGCTAATGT TATGAAGGAG 
ATTACCAATG CAGGCTACCG GGGTATACCC ATACCGGGTG ACCACCGGAC TGCTGTCTGC
ATAGTAGGCA ACCAGGGCAT GGTAGAGGAA AACCCCTTTC TGGCACTGGA AGGGGTCAAG
GAAGTGCTCA GGGTAACCAA GCCCTATAAA CTGGTCAGCC GGGAAACCTG CCCCGAACCC
ACCGTTATCC GTCTGGGAGA TGTGGAAATA GGAAACGGGT GCAAACCGGT TATAATAGCC
GGGCCTTGCT CGGTGGAGAG CGAAGAACAA ACCCTCCGCA TAGCCCGTCA GGTAAAAGAG
GGCGGTGCCA AGCTCTTCAG AGGGGGGGCA TTCAAGCCCC GCACTTCACC CTACAGCTTT
CAGGGTTTGG GTAAAGCCGG CCTCAAGATA CTTGAAAAAG TACACTCTGA AACCGGCCTC
TTTATTGTCA CCGAAGCTAC AGACTCTGAA AACCTGAAAC TGGTTGAAGA CAGCACAGAT
ATTATCCAGA TAGGTGCCCG CAATATGCAG AATTATTCCC TGCTGCGGCG GGCAGGCCAG
ACAAAAAAAC CGGTTATCTT AAAGCGGGGG CTGTCAGCCA CCATTGAAGA ACTGCTGATG
GCCGCCGAAT ACATTATGGC CGAAGGCAAC ACCCAGGTAA TATTGTGTGA ACGGGGTATC
CGCACCTTTT CAGACAACAC CCGCTTTACG CTGGACCTGA GTGCCATTCT GTCTGTAAAG
GCCGTAAGCC ATCTGCCAAT AATAGTAGAC CCCAGCCATG CGGCCGGACG CCGTGATTAC
GTTATCCCCC TGTCCAGAGC CGCCATTGCG GCCGGGGCAG ACGGGCTGAT AGTGGAAGTC
CATTCAGACC CCGCTGCCGC CCTGTCTGAC GGGGCGCAGT CTTTATATCC GGAACAGTTC
AACCGGCTGG CAAAAGAAGT GGAGTATTTA AATATGCTGG GAGTAGAAAA ATGCCTGAAG
TAA
 
Protein sequence
MLVIMKNDAT EAQIANVMKE ITNAGYRGIP IPGDHRTAVC IVGNQGMVEE NPFLALEGVK 
EVLRVTKPYK LVSRETCPEP TVIRLGDVEI GNGCKPVIIA GPCSVESEEQ TLRIARQVKE
GGAKLFRGGA FKPRTSPYSF QGLGKAGLKI LEKVHSETGL FIVTEATDSE NLKLVEDSTD
IIQIGARNMQ NYSLLRRAGQ TKKPVILKRG LSATIEELLM AAEYIMAEGN TQVILCERGI
RTFSDNTRFT LDLSAILSVK AVSHLPIIVD PSHAAGRRDY VIPLSRAAIA AGADGLIVEV
HSDPAAALSD GAQSLYPEQF NRLAKEVEYL NMLGVEKCLK