Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_121 |
Symbol | hupS |
ID | 8657075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | - |
Start bp | 120313 |
End bp | 121377 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | Ni/Fe hydrogenase, small subunit |
Protein accession | YP_003329622 |
Protein GI | 270307564 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATGAAT TAAGTGTTTT GCCAAGCGGT TTGCGGGTAA TAAGCCACCA TATGCCTGCC AGCCGTTCGG TTACCATTTG CGTATATATC GGGGTGGGTT CGCGTTATGA AACAGACTGC GAGGCCGGTG CCAGCCACTT TATAGAACAC ATGGTATTCA GGGGTAGCAA AAAGTATCCT GATTCCCAGC TTATTTCCAG TGCCATAGAG GGGGTGGGGG GTATTTTGAA TGCGGCTACC GACCGTGAGT CTACCCTTTA TTATGCCAAA GTGGGCAGTG ACAAGTTTGC TCTGGCATTA GATGTGCTTT CGGATATGCT TGTAACCCCC CTGTTTAACC CCGAAGACCT TGAAAAAGAA CGCAAGGTAA TCTATGAAGA AATAAGCATG AGCCTGGACA ACCCTTCCCA CCGGGTGGGG CTGCTGCTTG ATGAGATACT CTGGCCGGAT CACCCGCTGG GGCGGGATAT TGCAGGTACT CGACAGAGCG TGGCAGGGCT GGACAAACAA AAATTGCAGG CTTTCATGCA CAGCCATTAC AACCCTGCCA ATATAGTGGT GGCAGTAGCC GGAGATATAA AGCACAAGAG TGCCGTGGCG GCTATTTCCC AGGCCTTCAG TGGTTTGCGC GGGAAGAATG AAATACAGTC TTTTGCCCCA TATCATTATG GCAATCCTTG CCAGATAGGG GTGGACAAGC GAGATGCGGA GCAGATTAAC CTGATGATAG CCATGCCGGG CATGAACCGT CTGGATGACT GCCGTTATGC TTTCAGCATA TTAAACACCA TATTGGGTGA TGGTATGAGC AGCCGCCTTT TTGCCCATGT CAGGGATAAT TTGGGCTTAG CCTATTCTGT CCAGTCCGGT ACGGAGTTTT TGCATGATAC AGGGGCTTTT TCCATATATG CCGCAGTAGA TCCTGCCAAT CTGACGGCCT GTGTCGAAGC TATACTTACG GAACTGGAAA GCGCAAAAAC AACCATAACG GCTGAGGAGT TGACAAAAGC CAAGGAAATG TCTAAGGGAC GGATACATCT GGCTATGGAA GACAGCCGTT ATATGGCTAA ATGGATAGGC TCTCAGGAAC TGCTGTGCCG AAGGGTGAAT ACCCATGAAG ACGTTATTCG TCTGATAGAC GAGGTAAGTC TGAAAGCTGT AATGGAATTG GCGGGTGAGT ATTTTAGGAA ACCTGAAATG CGGCTGGCTC TGGTAGGGCC GGTAGACAAA GAAGCAGTGG CGGGTTTACT GAAAGGCTAG
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Protein sequence | MFNTKLTRRD FVQLAAGSTA ALSLGALKLP EFEKMFAEAL KEIPVIWLQG AGCNGCTIST INVVSPTIQD LLLTSVVPGT HVSMQYHPTI MAAQGDLAMS TITDTAAKGP FVLVIEGSVP LKDDGVYAEI GEKDGEGITM LEHVLNLAPK ALAVVAAGTC SAFGGITASA PNPTGAKAVS EILKEHNITT PVVNLPGCPP HPDWVVGTLA TVLMSGLDAL DLDDMGRPKA YYGKLLHDQC PRRGHYEKGL FATKLSEPYC LFLVGCKGPV TYADCSDRLW NNKTRWCVEA DSPCIGCAHP GFPDEVSPMF EAPPVINSTD KLAIGIAGTA VVLTAGVAAV ELAKKAKRNA AKKG
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