Gene DhcVS_1190 details

Gene Information

• Locus tag: DhcVS_1190
• ID: 8658118
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. VS
• Kingdom: Bacteria
• Replicon accession: NC_013552
• Strand: -
• Start bp: 1101265
• End bp: 1101915
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 52%
• Product: transaldolase-like protein
• Protein accession: YP_003330630
• Protein GI: 270308572

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000125483
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTATTT TTCTGGATAC CGCTAATATT GAAGAGATTA AAAAAGGCCT GAAACTGGGA 
GTGGTGAGCG GTGTTACCAC CAATCCTACT CTGGTTGCCA AAGAAGGCAT CAGTGATTAT 
AAATCCGTAG TCCAGCAGAT ATGTGCCTTG TTGCCGGAGG GTGATGTCTC CGCCGAAATT 
ACGGCTGAAG ACCCCGCCGA AATGCTCAAG CAGGCCCGCG AGATAGCTAA ATGGGCACCC 
AACGTGGTGG TTAAAATACC AGCCACCGCC GAAGGGCTGG AGATTATTTC CAAGCTGAGC 
AAAGAGGGTG TCCGCTTCAA TATGACCCTA TGTTTCTCGG TCAACCAGGC TTTGCTGGGG 
GCTTTGGCCG GTGCGGCCTT TGTCAGCCCG TTTGTGGGCA GGCTGGATGA CGCCGGGCAT 
GACGGCATGA TGCTTATAAA TGATATTGTC AGTATATATA AGGAATATGG TTTTGAAACC 
CAGGTGATTG CCGCCAGTAT CCGCCACCCG CTCCACTGCA CCCAGGCGGC CCAGACCGGT 
GCCGGCATTG CCACCGTACC TTACAAGGTG CTTATGCAGA TGATGCAGCA CCCGCTGACA 
GATTCGGGTA TTGCCCGTTT CATGGCTGAC TGGAAAAGTG TCCAGAAGTA A 

 

Protein sequence

MRIFLDTANI EEIKKGLKLG VVSGVTTNPT LVAKEGISDY KSVVQQICAL LPEGDVSAEI 
TAEDPAEMLK QAREIAKWAP NVVVKIPATA EGLEIISKLS KEGVRFNMTL CFSVNQALLG 
ALAGAAFVSP FVGRLDDAGH DGMMLINDIV SIYKEYGFET QVIAASIRHP LHCTQAAQTG 
AGIATVPYKV LMQMMQHPLT DSGIARFMAD WKSVQK