7 homologs were found in PanDaTox collection
for query gene DhcVS_1160 on replicon NC_013552
Organism: Dehalococcoides sp. VS



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_002936  DET1379  auxin-responsive GH3 protein homolog, putative  95.03 
 
 		 543 aa  1057    Dehalococcoides ethenogenes 195  Bacteria  normal  0.250734  n/a   
 
 
-
 
NC_009455  DehaBAV1_1190  GH3 auxin-responsive promoter  95.03 
 
 		 543 aa  1067    Dehalococcoides sp. BAV1  Bacteria  normal  0.259231  n/a   
 
 
-
 
NC_013552  DhcVS_1160  hypothetical protein  100 
 
 		 543 aa  1135    Dehalococcoides sp. VS  Bacteria  normal  0.104088  n/a   
 
 
-
 
NC_013037  Dfer_3419  GH3 auxin-responsive promoter  21.39 
 
 		 504 aa  59.3  0.0000002  Dyadobacter fermentans DSM 18053  Bacteria  hitchhiker  0.0000000537388  normal  1 
 
 
-
 
NC_013162  Coch_0752  GH3 auxin-responsive promoter  20.98 
 
 		 502 aa  55.8  0.000002  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_014148  Plim_0953  GH3 auxin-responsive promoter  24.5 
 
 		 586 aa  51.2  0.00005  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.0561894  n/a   
 
 
-
 
NC_013061  Phep_3685  GH3 auxin-responsive promoter  19.45 
 
 		 502 aa  47  0.0008  Pedobacter heparinus DSM 2366  Bacteria  normal  0.46637  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>