Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DhcVS_1144 |
Symbol | |
ID | 8658073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. VS |
Kingdom | Bacteria |
Replicon accession | NC_013552 |
Strand | + |
Start bp | 1056460 |
End bp | 1058544 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | HAD-superfamily hydrolase |
Protein accession | YP_003330586 |
Protein GI | 270308528 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.191056 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGAATTG AAAGCCTGCG CCCCGCCGAA CATCTGGGAA ACGTAACCAT ACACGGCGTA AGGCGTTTTT TAGAACTTGA TTCCGGTGCT CCCAGCCTGC CGCACCTGCA GGAGAGCCGC GAAGTAGAGA TGGTAGACCA ACAGGCTATT TCAGATGTTG AAAAGAAAAT GGCTATCATC CTGCCTATAA AGGACGAAGA TCTGAAGGTT TTTGAAGGTG TACTAAGCGG CGTACCCCAT GACTGCCTGA TGATAGTTAT CAGCAACAGC TCCAAACAGG AAGTGGATAA TTTCAAGAAT GAAAAAGACA TAGTAAACCG CTTCTGCCGT ATAACCCACC GCCAGGCTAT AGTTGTCCAC CAGAAAAACC CCGAACTGGC AAATGCTATT GCAGATGCCG GCTACCCCGA ACTGCTGGGG GAAGACGGGC TTATCCGCAG CGGCAAGGCA GAGGGTATGA TACTGGGTAT TATACTGACT ATGTTCAGCG GGCGGGAATA CGTGGGTTTT ATAGATACCG ACAACTACAT ACCGGGGGCA GTTTGGGAAT ACGCAAAACA TTTCGCCACC GGTTTTAATC TGGCTCAGTC GCCATATTCC ATGGTAAGGG TGCTCTGGAA GTACAAGCCC AAGCTGGTAG GAGAACTATA TTTCAAACGC TGGGGACGGG TGTCAGAGGT TACCAATAAA CACCTCAATC ACCTGATATC CAGCAAGGGT AAATTTGAAA CCGAGATAAT CAAAACCGGC AATGCCGGTG AACATGCCAT GAGCATAGAG CTGGCTAAAC GCCTGACTTA CGGCACAGGT TATGCGGTGG AAACCAAAGA GATTATGTCC ATACTGGAAC AATTCAGCGG CATATTGCCT ATAGAAGACA GGGAAGTAGC TGAAGAAGGG GTGGAAATAC TCCAGACTGA AACCATTAAT CCTCACCTTC ACGAGGACAA GGGCGGCGAC CACCTGATAC AGGATATGCT TTTACCCAGT CTGGCGGTCA TATATCACAG CCCTCTGGCT GACGAAGCCG GCCGGAAAAT GATTGAAACC CAACTGGCAG GAATTGAGGG AATGGAAAGC AACCCTGAGA TACCCCATAT AAAGCTGATT CCTCCCCCCC AGAAAATGGA CCTTCAGAAA TTTTCAGCCA CTATTGAAAA ATACCTGCCC CAGATGGTTT TGCCGGACGG AGAGCTCATT TCACGGGTAG CCCGCCCTTC CCGCCTGCCT TCATCAGGAC AATTTAAAAA GATTGTATAT ACTGACTTGG ACGGCACTCT GCTGAACCCT TTGACTTATT CATATTCAAC CGCACTGGAT GCCCTGCGTT TGTTAAAAGA CAAAGAACTG CCTCTAGTAT TCTGTTCTGC TAAGACCATG GGGGAACAAG ACCTGTACCG CAACGAACTG GGTATAAAAG ACCCCTTTAT AACTGAAAAC GGGGGAGCTA TATTTATCCC CAAAGATTAC TTCCGCCTGC CCTTTGCTTA TGACAGAGTA GCCGGGAATT ATCTGGTGAT TGAACTGGGA ATGAACTACA AAGATATCCG CCATATTCTT AAAAAAGCCT TGGCGGAAGC CTGCACCGAG ATAGAAAACT CTGAAAAAGC CGGCAATATA TTTATTACCA GCTTCGGGGA TATGTCTGTG GAGGATGTCA GCCGCCTTAC TGACCTTAAC CTGAAACAGG CTGAACTGGC CAAACAGCGT GAATACAGTG AAACCGTACA CATAGAGGGT GATAAGAGAA GCACCAATAT TGTTTTGAAC CATATACAGC AAAGCGGGCT GGAATATAGT TTCGGGGGAC GTTTTTACGA AGTCACCGGC GGCAATGACA AAGGCAAAGC CATAAAGATA CTAAACGAAC TTTTCCGCCT GAATTTCGGC AATATCCACA CCTTTGGTCT GGGTGACAGC GAAAATGACT ATTCCATGCT GGAAACGGTG GACTCTCCCA TACTGGTGCA ACGCCCCGGC AACAAATGGC ACAAGATGCG ATTGCGTAAT CCCAGTTATG TCAGAGGGGT GGGGCCGGAG GGTTTCAGCC GGGCAGTTAC TGACATAATA CTGCCCATGG AATAA
|
Protein sequence | MRIESLRPAE HLGNVTIHGV RRFLELDSGA PSLPHLQESR EVEMVDQQAI SDVEKKMAII LPIKDEDLKV FEGVLSGVPH DCLMIVISNS SKQEVDNFKN EKDIVNRFCR ITHRQAIVVH QKNPELANAI ADAGYPELLG EDGLIRSGKA EGMILGIILT MFSGREYVGF IDTDNYIPGA VWEYAKHFAT GFNLAQSPYS MVRVLWKYKP KLVGELYFKR WGRVSEVTNK HLNHLISSKG KFETEIIKTG NAGEHAMSIE LAKRLTYGTG YAVETKEIMS ILEQFSGILP IEDREVAEEG VEILQTETIN PHLHEDKGGD HLIQDMLLPS LAVIYHSPLA DEAGRKMIET QLAGIEGMES NPEIPHIKLI PPPQKMDLQK FSATIEKYLP QMVLPDGELI SRVARPSRLP SSGQFKKIVY TDLDGTLLNP LTYSYSTALD ALRLLKDKEL PLVFCSAKTM GEQDLYRNEL GIKDPFITEN GGAIFIPKDY FRLPFAYDRV AGNYLVIELG MNYKDIRHIL KKALAEACTE IENSEKAGNI FITSFGDMSV EDVSRLTDLN LKQAELAKQR EYSETVHIEG DKRSTNIVLN HIQQSGLEYS FGGRFYEVTG GNDKGKAIKI LNELFRLNFG NIHTFGLGDS ENDYSMLETV DSPILVQRPG NKWHKMRLRN PSYVRGVGPE GFSRAVTDII LPME
|
| |