| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4957 |
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| Symbol | |
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| ID | 7261989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 5275192 |
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| End bp | 5276571 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643564868 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002461385 |
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| Protein GI | 219670950 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000028541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGATA CGATTATTGC TTTAGCTACG GCTGTAGGTG AAGGAAGTAT ACATGTTTTA
AGACTAAGCG GACCCCAGGC CCAGGAGATC ATTGAGCGAG CCTTTACACC TCACCACCCT
CAGCGCTGGC AGGAAAAAAG CAATTTTACC TTGCACTTAG GTTATTTTCG GGCGGGGGCA
AAGGTCCTGG ACGAAGTGCT CATCGGCAGA ATGTCAGCCC CAGGCTCTTA TACAGGGGAG
GATGTCTATG AGATCAATTG TCATGGCGGT CTCTATGTCG CCGAGCGGAT TATGAGAGAA
TGTATAGGCC TGGGGGCACG TCTGGCTGAG GCCGGAGAAT TCACGAAGCG CGCTTTTCTT
AATGGCAAGC TGGATTTAAT TCAGGCGGAG GCGATTGTGG ATTTGATAGC AGCCAAAACG
GACAGTTCGG CTGATCTGGC CCTTGCCCAG ATGGAGGGCT TGCTTTCTCA AAAAATCCTT
TTGCTTAAGG ATCAGGTGAT GGAGACCCTG GCTTTTATCG AGGCCGGTAT TGATTTTCCT
GAAGATGATG TGGAAAGTTT GGATCGGGAT GCTCTCCTCC AGCGCATCAG CAAGGGTCTT
GAGCTGGCTC GTGATTTGCT TGATGGGAGC AAGACGGGAA GAATACTCCG GGAAGGCATG
CTGACGGTGA TTGTCGGACA GCCTAATGTG GGCAAATCCA GCCTGCTCAA TGCTCTGATG
GGGGAAGAGA GGGCTATTGT TACAGATATA CCGGGGACGA CCCGGGATGA GATTCGGGAA
TCGGTCACTA TCGGCGGCAT ACTTTTGCAG TTGGTGGATA CGGCGGGACT TCGGGAAAGC
GAGGATCTTG TTGAGAAACT GGGCATTGAA CGATCCTGGA AGGCTATGGA GAAAGCTGAA
CTGATACTTC TCATCATCCA GGCCGGCCAG GAGCTCAAGG CTGAAGAGTT GAAGATCTTA
AATCAGTATG ATCAAAGTGT GATCGTTTTA ATTAATAAAA TGGACCTTCT GGTCGGCAAG
GAACAGGGGG AGGAAGTTCT TGAGAATTAC CCCACTCAGC AAGGGGTATG GATTCCTTTT
TCGGTGAAAG AGAATTTGGG CTTTAAGCAG TTGGAGAAAG AGATTAAGCA AAGGGTCTAT
CAGGGCAAGG CAGAAAAAAC TAAAGAGCCC TTACTCTCCA ACATCCGTCA AATCACCGCC
TTAGAGAGGG CCGTATCAGC CTTGGCAAAC GGTTGGGATT CGGTTAAGAA CGGCCTGCCC
TGGGATATGG TATCCATTGA TATCCGCCAG GCTCTTCAGG AAATTTCCCA AATGACGGGG
GATAGTGTTC AAGAGTCCTT GTTGGATGAT ATTTTCTCAC GATTTTGTAT AGGAAAGTAG
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| Protein sequence | MDDTIIALAT AVGEGSIHVL RLSGPQAQEI IERAFTPHHP QRWQEKSNFT LHLGYFRAGA
KVLDEVLIGR MSAPGSYTGE DVYEINCHGG LYVAERIMRE CIGLGARLAE AGEFTKRAFL
NGKLDLIQAE AIVDLIAAKT DSSADLALAQ MEGLLSQKIL LLKDQVMETL AFIEAGIDFP
EDDVESLDRD ALLQRISKGL ELARDLLDGS KTGRILREGM LTVIVGQPNV GKSSLLNALM
GEERAIVTDI PGTTRDEIRE SVTIGGILLQ LVDTAGLRES EDLVEKLGIE RSWKAMEKAE
LILLIIQAGQ ELKAEELKIL NQYDQSVIVL INKMDLLVGK EQGEEVLENY PTQQGVWIPF
SVKENLGFKQ LEKEIKQRVY QGKAEKTKEP LLSNIRQITA LERAVSALAN GWDSVKNGLP
WDMVSIDIRQ ALQEISQMTG DSVQESLLDD IFSRFCIGK
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