Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4945 |
Symbol | |
ID | 7261977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 5264958 |
End bp | 5265989 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643564857 |
Product | hypothetical protein |
Protein accession | YP_002461374 |
Protein GI | 219670939 |
COG category | [S] Function unknown |
COG ID | [COG3949] Uncharacterized membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000030592 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAA GAGTCATTTT TCAAATTGCT GCAACCTATG TTGGGGCAGT TATGGGAGCA GGCTTTGCCT CTGGTCAGGA GATACAACAG TTTTTCGCTA ATTTCGGCAA TGCAGGAATC ATCGGGATTC TGTGCAGCAC GGTTCTCTTC GCCGGCTTGG GGTGGATCAT GCTTGATCTG CAGAAACGGT GGCAAGTGAC CTCCTATGCC GATTTTTTTG AACGTTTATT TGGCAAGCGC TGGGGCAGCA GAATGGACAT CCTCGTGAGC CTGCTTTTAT TCATCGGCAT GGTGGCCATG ATGTCAGGGG CTGGGGCAGT CTTTCGGCAG TTTTTTAACT TATCCCCTTG GCTGGGCATT CTGATCACAG CTTTGATCAT ATCCCTGGCC CTGTGGTTCA AGGGAGAAGG TGTGCTTTGG ATCAATAGCA TGCTTATACC CCTGAAATTC GTGTTCTGCA TCGGCATCGG CTTATGGGCC ATACTCTTTG CAATGGGAAC AAAAGACGCG GGGATAGAAC TTGTCACCAA TCCTCTTATC CATAATTGGC TGTTCTCCAG TATTCTCTAT GTTTCATTTA ATCTAACCTT GGCTATGGTG GTCTTCGCTT CTCTCGGCAA GGAAGTTCAG AGGCCGGAAG GCCGTCTGGG AGCTTTATTG GGCGGAATGG CTCTTGGTCT ATTTGCCCTG GTGATTGCCC TGACACTTTT GAAGTTTCCT GAAGTCAGGG GGTTTGAGAT ACCCATGGTT GCCGTAGCGG GAAGCTTAGG ATCATGGCCG GGCTTTTGCT ATGTGACTGT CCTTTGGTTA GCGATGCTTA CGGCAGCCAT TGGCAATGGT TTTAGTCTGA TCACCCATAT GGAGAAGAAA TTCAAATTCC ATTATAAAAA GGCGGCAGCC TTCCTCCTCC TGTTGGTCGT TCCTCTTTCG GGGGTGAAAT TTTCTTTAAT AGTAAAGATG ATCTATCCCC TATTTGGCTA TCTGGGTTTG GTGTTTATTC CCGTGCTCTG TTGGTCCTGG TTAAAAAGAT AG
|
Protein sequence | MNKRVIFQIA ATYVGAVMGA GFASGQEIQQ FFANFGNAGI IGILCSTVLF AGLGWIMLDL QKRWQVTSYA DFFERLFGKR WGSRMDILVS LLLFIGMVAM MSGAGAVFRQ FFNLSPWLGI LITALIISLA LWFKGEGVLW INSMLIPLKF VFCIGIGLWA ILFAMGTKDA GIELVTNPLI HNWLFSSILY VSFNLTLAMV VFASLGKEVQ RPEGRLGALL GGMALGLFAL VIALTLLKFP EVRGFEIPMV AVAGSLGSWP GFCYVTVLWL AMLTAAIGNG FSLITHMEKK FKFHYKKAAA FLLLLVVPLS GVKFSLIVKM IYPLFGYLGL VFIPVLCWSW LKR
|
| |