| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4895 |
|---|
| Symbol | |
|---|
| ID | 7261924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 5217446 |
|---|
| End bp | 5217994 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643564805 |
|---|
| Product | microcompartments protein |
|---|
| Protein accession | YP_002461325 |
|---|
| Protein GI | 219670890 |
|---|
| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 84 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATAGAG CAATAGGTAT GATTGAGCTT ACCAGTGTGG CCAGAGGAAT CTATGCCACC
GATCAGATGC TTAAAATAGC TTACGTTGAT GTGGTCAGTG CAACCCCCGT CTGTCCGGGC
AAATATATTG CTATCGTGCA AGGGGATGTG GCGGCCGTCG AAAGTTCGAT CAGCACAGGG
ATAGCCATTT CCGGGGAATA TTTAGTGGAC AGCTTCGTGC TGCCCAATGT TCATGAAGGA
ATTTTCCCGG CGATCACGGC CACGACCATG CCGGACGGAA CCGGGGCCCT GGGAATTATG
GAATCTTTCT CCATGGCCTC CATGATCACG GCTGCTGATG CGGCACTGAA AGCCGCCGAT
GTTCAGGCTC TGGAACTGCG CCTGGGCAGC GGACTGGGCG GCAAAGCGTA CTTTACTTTT
ACCGGGGATG TGGCCGCTGT GGAAGCAGGT ATTGAGGCAG GGAAGGCCAT TGCTATGGAA
AAAGGCCTCC TTGTGGATAT TGAGGTCATT CCTTCCCCGT CCGATAGATT GTGGACATCC
CTATATTAG
|
|---|
| Protein sequence | MYRAIGMIEL TSVARGIYAT DQMLKIAYVD VVSATPVCPG KYIAIVQGDV AAVESSISTG
IAISGEYLVD SFVLPNVHEG IFPAITATTM PDGTGALGIM ESFSMASMIT AADAALKAAD
VQALELRLGS GLGGKAYFTF TGDVAAVEAG IEAGKAIAME KGLLVDIEVI PSPSDRLWTS
LY
|
|---|
| |