| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4884 |
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| Symbol | |
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| ID | 7261913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 5207365 |
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| End bp | 5208747 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643564794 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_002461314 |
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| Protein GI | 219670879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.182378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGCCT TGCATAATTT TATCGTCTGG CTGAACGACT ATCTCTGGGG CCCACCGATG
CTTGCTTTGC TTTTTGGCAC GCACTTATTC CTTACGTTTC GTACTCGTGG TATTCAAAGG
CATATTTTTA AGGGGATCAA ATTATCTCTT ACGAAGGATC CTGATGCCAG CGGCGATGTG
AGCCAATTCG GAGCTCTGAC CACCGCTCTC GCCGCTACCA TCGGAACCGG TAATATCGTC
GGGGTAGCTA CGGCCGTGGC TTTAGGCGGC CCCGGTGCCG TACTTTGGTG CTGGCTCACC
GGGGTATTCG GAATTGCCAC CAAATATGGG GAGGCCTTAT TGGCGGTGAA ATACCGGGTT
AAAACCGCTG ACGGCACCAT GCTGGGCGGC CCTATGTATG CTTTGGAAAG AGGCCTGGGC
CAGAAGTGGC TGGCTGTACT CTTCTGCATC TTTACTTCTA TTGCCGCCTT TGGTATTGGC
AATATGACTC AGGCTAATTC TATTTCCGGC ATGCTGAATT CTCAATTTAA CGTCAACCCT
ATCATTACCG GTCTTCTCTT AGCTTCCCTC ACTGGAATTG TAATCATCGG CGGAGTGAAG
TGGATCGCCC GGGTCTGTGA AAAATTTGTC CCCTTTATGG CGATTGCCTA TGTCCTTGGT
TGTATCATTA TCCTGATTAT AAACGCCTCC TATGTCTGGC CCGCCATTGT CTTGATCTGT
GAATCGGCTT TCACCCCCAC TGCAGCCGGC GGCGGATTCG TCGGTGCCAG TATCATCATG
GCCGCCCGTT ACGGGATTGC CAGGGGTCTT TTCTCCAATG AATCCGGTTT GGGTTCCGCC
CCCATCGTCG CTGCCGCCGC TCAGACCAGG AATCCTGTCC GTCAGGCTCT CGTCTCGGCC
ACCGGTACCT TCTGGGATAC CGTTGTCGTC TGCTTAATGA CCGGTCTGGT CGTGGTCAGC
AGTGTCCTTA GCAACCCGAC CGCCGCCGAA GGGTTAAAAG GCGGTGATTT AACTTCTATG
GCTTTTAGCC AGATTCCAGT AATTGGCCCT ATCGTTTTAA CCTTCGGGCT TTTGACCTTT
GTTTTCTCTA CCATCCTGGG CTGGTCTTAC TATGGTGAAA GAGCTGTGGA ATACCTCTTT
GGCAAAAAAG GCATCCTCCC TTACCGCCTC CTCTGGGTTC TCGCTGTTTT AGCCGGTTCT
TTGGTCACTC TGCAATTCGT CTGGGATTTG GCGGATGCAA TGAACGCTAT GATGGCTATT
CCCAACCTTG TGGCACTCCT TCTTTTAAGC GGAGTTATTG TCTCGGAAAC CAGGAAGTAT
CTATGGGAAG ATCGTCTGGA TGAAGCCTCT GATGAGCCCA TCCCCGTCAT TCAGAATAAA
TAA
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| Protein sequence | MDALHNFIVW LNDYLWGPPM LALLFGTHLF LTFRTRGIQR HIFKGIKLSL TKDPDASGDV
SQFGALTTAL AATIGTGNIV GVATAVALGG PGAVLWCWLT GVFGIATKYG EALLAVKYRV
KTADGTMLGG PMYALERGLG QKWLAVLFCI FTSIAAFGIG NMTQANSISG MLNSQFNVNP
IITGLLLASL TGIVIIGGVK WIARVCEKFV PFMAIAYVLG CIIILIINAS YVWPAIVLIC
ESAFTPTAAG GGFVGASIIM AARYGIARGL FSNESGLGSA PIVAAAAQTR NPVRQALVSA
TGTFWDTVVV CLMTGLVVVS SVLSNPTAAE GLKGGDLTSM AFSQIPVIGP IVLTFGLLTF
VFSTILGWSY YGERAVEYLF GKKGILPYRL LWVLAVLAGS LVTLQFVWDL ADAMNAMMAI
PNLVALLLLS GVIVSETRKY LWEDRLDEAS DEPIPVIQNK
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