Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_4547 |
Symbol | |
ID | 7261576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 4839766 |
End bp | 4840512 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643564464 |
Product | diguanylate cyclase |
Protein accession | YP_002460984 |
Protein GI | 219670549 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00115443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAAAAT TTGTTCAGAT CTTTACCAAG CTGTTCATGA GCCATGCCCC TTTGATTCTC TCCCTATTGG GTATCTTACT GTGGCTCTTA GCCTATTTTA TTTATTGGTT TTTCCCTCTG CATCAGGCAC GCTGGGTTTG GCTGTCCGTC GTGGTCGTTT TAATTTTTAA TGGCATCTCC CTGGGTGAAT TTGTTAAGAC TTTGGCGGTT AAGGGGTATA CAGACTCCAT GACGGGGTTG CCCAATAAGG GTTTTATGTA CCTGCGCCTG AATATCGATA TGGAAAAATA CGCAAAGCAA GAAAAAGAAT ACTCCCTGGC CATGATTGAT ATCGATCGCT TTAAGAATAT CAACGATACT TATGGCCATC TTGCCGGGGA TAAGGTGATT AAGGAAGTCG CCGGGCTCCT GCGTAAAAAT GTCAGGGCCA GTGATGAAGT CATCCGCTGG GGCGGCGAAG AGTTTGCGAT TTTATTGCCT GAAACCAGCG AAGAGGGAGC GGCTAATCTC ATTGAGAGAA TCCGCAACCT TATGGAAAAT CATGACTTTG GCCCGGAGAT AGCTTCCCAA AAAGTAACCT TTAGTGCAGG CGTGGTTTCT TATAAGAAGC TGGAAGAAGT CAAAGCCAAA GAGAACAGGC TTACCAACAA TACGGATCTC ATCGTAAATT TCTCCGACCA GGCTTTGTAC CAGGCCAAGA AGACCCGCAA TACCGTCTGG CGCTTTAGTC AAGGGATTAT TGCTTAA
|
Protein sequence | MKKFVQIFTK LFMSHAPLIL SLLGILLWLL AYFIYWFFPL HQARWVWLSV VVVLIFNGIS LGEFVKTLAV KGYTDSMTGL PNKGFMYLRL NIDMEKYAKQ EKEYSLAMID IDRFKNINDT YGHLAGDKVI KEVAGLLRKN VRASDEVIRW GGEEFAILLP ETSEEGAANL IERIRNLMEN HDFGPEIASQ KVTFSAGVVS YKKLEEVKAK ENRLTNNTDL IVNFSDQALY QAKKTRNTVW RFSQGIIA
|
| |