Gene Dhaf_4263 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_4263 
Symbol 
ID7261287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp4511567 
End bp4512580 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content50% 
IMG OID643564179 
Producttransport system permease protein 
Protein accessionYP_002460704 
Protein GI219670269 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000122038 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTA AAAACCAAGG CATCTCTATG GTCGTAGGTC TTGGCATCCT TTTACTGATC 
ACCATCATTA TCTCTTTTCA GCTTGGCCGT TATCCCATTC CGCCCAAGGA ATTGTTCGGA 
ATTCTCTTAT CTAAAATTTT TCCCGTCGAG CAATTTTGGG CCGACCGTTT GGAAATCGTG 
CTGATCAACA TTCGTTTACC CCGGATTCTT TTGGCTTGTT TGGTCGGCTG CTGTCTATCG 
GCTGCGGGAG CTGCCTATCA GGGCGTTTTT CAGAATCCCA TGGCCTCTCC GGATATTCTG 
GGAGCCTCAT CAGGAGCTGC CTTTGGTGCT GCCCTGGCCA TACTTCATCA CGGCGGCAAT 
AGCTTAATCA TTCTGAGTGC TTTTACCTTC AGCCTCCTTA CTGTAGCTAT TATTTATTTT 
ATCAGTAAAA AAGCCAAGGG CAACAATCTG CTTGGTTTGA TCTTAGCCGG AATCATGGTG 
AGTTCACTTT TTTCAGCCGG TACCTCGTTT ATTAAGTTGG TCGCCGACCC TAATGATCAA 
CTGCCGGTGA TCACGTATTG GCTGATGGGC AGTTTATCCG GGTCGAAACT AAGCGATATT 
GCTTTCGCAG TTCTGCCTAT GGCCGTCGGC TTGATCCCCT TGCTGCTCCT GCGCTGGCGG 
CTCAACATAC TCACCCTTGG TGATGATGAA GCCAAAACTA TGGGGGTCAA TGCCAAACAA 
ATCCGCCTGC TGGTCATCAT CTGTGCCACC TTTGTTACGG CGGCCAGCGT CTCGGTAAGC 
GGCGTGATCG GCTGGGTCGG TTTGGTCATT CCTCATCTGG CCCGCAGGCT TGTGGGAAGC 
AACTACACTG CACTGATGCC GGCTACGATG CTTACGGGGG CAGTCTTTCT CCTTATCGTC 
GACAACTTTT CCCGCAATCT GCTTACCACA GAGATTCCTC TGGGAATTCT TACTGCCTTA 
GTCGGAGCTC CCTTCTTTAT CTATCTGATT ACCCGAAGGG GGGAGACCTA TTGA
 
Protein sequence
MKRKNQGISM VVGLGILLLI TIIISFQLGR YPIPPKELFG ILLSKIFPVE QFWADRLEIV 
LINIRLPRIL LACLVGCCLS AAGAAYQGVF QNPMASPDIL GASSGAAFGA ALAILHHGGN 
SLIILSAFTF SLLTVAIIYF ISKKAKGNNL LGLILAGIMV SSLFSAGTSF IKLVADPNDQ 
LPVITYWLMG SLSGSKLSDI AFAVLPMAVG LIPLLLLRWR LNILTLGDDE AKTMGVNAKQ 
IRLLVIICAT FVTAASVSVS GVIGWVGLVI PHLARRLVGS NYTALMPATM LTGAVFLLIV 
DNFSRNLLTT EIPLGILTAL VGAPFFIYLI TRRGETY