| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4262 |
|---|
| Symbol | |
|---|
| ID | 7261286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4510522 |
|---|
| End bp | 4511220 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643564178 |
|---|
| Product | cobalamin synthesis protein P47K |
|---|
| Protein accession | YP_002460703 |
|---|
| Protein GI | 219670268 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.000645522 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTTA TTACTGTGGC GGGGCCCCCG TCATCAGGCA AGACTTCGGT CATCTTAAGG
CTGGTTGAGT CTATGCCGGA AAAGAAGAAG ATCGGTGTCG TAAAATTTGA CTGTTTGACT
TCTTTTGATA ATTTGAGCTA TGAAGAGGCA GGGATCCCTG TGCAGACCGG TTTTTCAGGG
AAGATCTGCC CGGATCATTT CTTTGTCAGT AATATTGAAG ATGCGGTACA GTGGGGGATT
CAATCAGGTT TTGAACTGCT GATCACGGAA AGTGCAGGGT TATGCAACCG TTGTTCCCCT
TATATCAAAG GTATCCTATC CATTTGTGTC ATCGATAATC TATCCGGTAT CAATACCCCC
CGAAAAATTG GGCCGATGCT GAAATTTGCC GATATCGTCG TGGTTACCAA AGGGGATATT
GTCTCCCAGG CCGAGCGGGA AGTTTTTGCC TTTAATATCA CTCAGGTCAA TCCCGCCGCC
CGGATCGTCT TTGTCAATGG CATTACCGGA CAAGGGGCTT TTATTCTTGC CAAGCATTTG
CAGCAGGCCA GGGACATTGA AACCACCCGG GATATGAAAC TGCGCTTTAC CACACCGGCG
GCCGTCTGTT CCTACTGCAC AGGTGAGACG AGGATTGGAG AGCCTTATCA GATGGGAATG
ATGAAGAAGA TGGAGTTTGG CAATGATGAA AAGCAATGA
|
|---|
| Protein sequence | MKLITVAGPP SSGKTSVILR LVESMPEKKK IGVVKFDCLT SFDNLSYEEA GIPVQTGFSG
KICPDHFFVS NIEDAVQWGI QSGFELLITE SAGLCNRCSP YIKGILSICV IDNLSGINTP
RKIGPMLKFA DIVVVTKGDI VSQAEREVFA FNITQVNPAA RIVFVNGITG QGAFILAKHL
QQARDIETTR DMKLRFTTPA AVCSYCTGET RIGEPYQMGM MKKMEFGNDE KQ
|
|---|
| |