Gene Dhaf_4218 details

Gene Information

• Locus tag: Dhaf_4218
• ID: 7261242
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 4463424
• End bp: 4464011
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 643564136
• Product: spore germination protein-like protein
• Protein accession: YP_002460661
• Protein GI: 219670226
• COG category: [R] General function prediction only
• COG ID: [COG5401] Spore germination protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.00000000000199131
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCAAGA CTAAATTCCG CTGTTTGATG ATCGCATTTT CCATATTCCT TTTAACCTTT 
GGCTTAGTAG GCTGTGGATC CGATGACACC ACGAAGAATA CTCCCCCACC CCCTCCCCCC 
AATGTAAATG ATCCCCAGAA TCCCGACCCG GTTGAACCGG CTCCCGCAGA AACCGTGAAA 
GTTACGATGT ATTTCCCTAC GTCGGATGCA ACAGGTCTTG ATCCCACTGA GCGGACAATA 
AACGTGGCCA AAGCAGCAAG CGAAGAAGTT ATCGCCGGAA TGTTCAAGGA GTTCGCAAAT 
CCTCCTTCAG GTTTAGTGGC TCCCCTCCCA AAGGATACCA AGCTTTTGGA TGTTAAGATT 
AAAGACGGTG TCGCCACCCT TAATCTGTCC CATTCCTTCA GAGAGAATTT TGAGGGCGGG 
GCCACAGGAG AAGAGATGGT CCTCTATAGC ATTGTCAATT CCTTAACCAC CCTTGAGGAT 
GTGGACTCGG TGGAATTCCT TTTAGAAGGG GAACTTAAGG CAGCTATTCT CGGCGGTTTG 
GATACATCAA CACCTGTAAC GGCCAATGAA AGCTTAATTT TGAAGTAA 

 

Protein sequence

MCKTKFRCLM IAFSIFLLTF GLVGCGSDDT TKNTPPPPPP NVNDPQNPDP VEPAPAETVK 
VTMYFPTSDA TGLDPTERTI NVAKAASEEV IAGMFKEFAN PPSGLVAPLP KDTKLLDVKI 
KDGVATLNLS HSFRENFEGG ATGEEMVLYS IVNSLTTLED VDSVEFLLEG ELKAAILGGL 
DTSTPVTANE SLILK