| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4123 |
|---|
| Symbol | |
|---|
| ID | 7261143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4371058 |
|---|
| End bp | 4372047 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643564040 |
|---|
| Product | protein of unknown function DUF1078 domain protein |
|---|
| Protein accession | YP_002460568 |
|---|
| Protein GI | 219670133 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCGCATTC TGAATACAGC AGCTACTGGG GTCCGGGCTC AGCAGACAGC TTTGGATGTA
CTGGGCAATA ATATGTCCAA TGTCAATACA CCGGGATATA AGGCTCAGCG GGTGAATTTT
GCCGAAGCTT TGGCTGCGGA AATGCGGCCG GCTGAACGTG AATTTAATGG ACAGCCTGTG
GGAGAGCGGA TCGATGTGGG AGCCGGTGTG ATTTATCCGA CCATAGACAC GGATTATCGG
CAGGGAATCA TTCGGGAGAC AGAGAACCCC TTTGATCTGG CTATTGACGG GGAAGGCTTC
TTCCCTGTGC GGACAGCCAA TGGGGAGAGC CGCTATACCC GGGTGGGAAA CTTTGAGTTG
GACAGTCAAG GCAAGTTGGT TAATTCCGAC GGTTATATTC TGGAAGTAAA GATTCCAGCC
GATGCCATGG ATTTGTATGT GGATGAGACA GGCAATATCA CGGGATTTAT CGATGACGAG
GAAAGAGTTT TGGGCCGGGT TGTGGTCAAT GATCCGGAGG GAGAAGGGTA CCCGGTAGGA
CCAATTGATA TGGATGAATT GGGCCGTCCC TTGGATTGGA ATGGAGATAT TTTACCCACA
GCCTTTGCCG TTCCGGAAGG GGCTGAAGAT GTTCAGATCA GCACGGAAGG AATTCTTAGT
GCCACTATTG ACGGAAGCCG CCAGACTTTG GGGCAGATCA ATATAATTAC CTTTGCTAAC
CCGGAAGGGT TAGTCAGGGA CGGAGATAAT CTCTATTTTG CTCCCGACGC GGCCGGAGTG
ACCGGGGACG AATTGGTTGG CACGCCGGGC AGTCAGGTGG AAGAACGGAC CTTGGGTAAG
CTCAAGACCC AATCTTTGGA ACAATCCAAT GTGAACCTTG CTTCAGCCAT GACGGAGATG
ATCCAGGTGC AGAGGGCCTA TCAGCTCAAT GCCCGTATGA TTACCAACGG GGACCAAATG
TGGAGCATGG CTAACTCCTT AAGGAGGTAA
|
|---|
| Protein sequence | MRILNTAATG VRAQQTALDV LGNNMSNVNT PGYKAQRVNF AEALAAEMRP AEREFNGQPV
GERIDVGAGV IYPTIDTDYR QGIIRETENP FDLAIDGEGF FPVRTANGES RYTRVGNFEL
DSQGKLVNSD GYILEVKIPA DAMDLYVDET GNITGFIDDE ERVLGRVVVN DPEGEGYPVG
PIDMDELGRP LDWNGDILPT AFAVPEGAED VQISTEGILS ATIDGSRQTL GQINIITFAN
PEGLVRDGDN LYFAPDAAGV TGDELVGTPG SQVEERTLGK LKTQSLEQSN VNLASAMTEM
IQVQRAYQLN ARMITNGDQM WSMANSLRR
|
|---|
| |