| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_4069 |
|---|
| Symbol | |
|---|
| ID | 7261089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 4318272 |
|---|
| End bp | 4320320 |
|---|
| Gene Length | 2049 bp |
|---|
| Protein Length | 682 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643563986 |
|---|
| Product | stage V sporulation protein D |
|---|
| Protein accession | YP_002460514 |
|---|
| Protein GI | 219670079 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
|---|
| TIGRFAM ID | [TIGR02214] stage V sporulation protein D
[TIGR03423] penicillin-binding protein 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCCTT ATGTCGTCAT GCGCAAACGT ATCGCCTTTC TTTTTTTCTG TGTCAGTGCT
TTTTTGGTGG TGCTGATTGT CCGACTGGCC TTTGTGCAAT TGGCTCAGGG GGCGATTTTA
AGCGATAAGG CTGATGAAAG CCATTATCGG GGAGTTCCTG TAGCAGCCAA AAGGGGAAAT
ATTGAGGATC GCAACGGGGA GGTGCTGGCC ATGAGTGTCA GTACCGAGAC TGTCTATGCG
GTGCCTGCCC AAGTTCGCTC CTCCGGCAGA GCGGAGGAGA TCGCCCATGC TTTGTCCGGC
CTCTTGGAGA TGGGACCGGA GCAGGTTATG GAAAGAATAA CCAAGCGATC GGCTTTGGAA
TATGTCAAGA AAAGGGTGAC GGCAGAGGTG GCGGCTCAAG TCCGGGCCTT AGAGCTGCCT
GGGATTGGGA TTACTGAGGA TAGTGTGCGT TATTACCCCA ACAGCACCTT AGCTGCACAT
ATTATTGGCT TTGCGGGGAT TGACAACCAG GGGTTAGAAG GAATAGAGTT GACTAGGGAT
TCCGAGTTGA ACGGAGTCCC GGGTGCCGTA TTGACAGAGT TTGCTGCCAA TGGTATCCCT
TTGCCCTTTG CCAATCAAAT GTATGTTTCC CCGAAGAATG GCAATACGGT GCGTCTGACC
ATTGATAAAA ATATTCAGGC TTTTGCGGAG CGGGAACTGC AGAAGCTGAT GTCCGGCCAA
GGGGATAATA TGAATGGGCA GGTCCCCAAG AGCGGCACCA TCCTGGTTAT GGATCCCAAT
ACCGGGCAGG TCTTGGCTCT TGCTTCGGCG CCTACCTATG ATCCTAATTA TTACAACAAC
TATGATCAGA GTACCCGGCG CAATATAGCG ATTCAAAACG GCTATGAACC AGGTTCCACT
TTTAAGATTA TCACGTTGGC GGCTGCCCTT GAGGAAAAGA AGATCAGTCC TCAGGAAGGT
TTTTTTGATC CGGGAGGAGT GACCATCCTG GGTAAAACCG TTCATTGCTG GAAGCGTGGG
GGCCATGGCA GCCAGACCTT CACTCAGGTC GTGGAAAACT CCTGCAACCC AGGGTTTGTC
GCCATGGGCC AGCGCCTGGG TATGGATAAA TTCTATAAAT ACCTCCATGA CTTCGGTTTT
GGTCAGAAAA CGGGAATCGA AATGTCCGGT GAAGCTGTAG GAATTTTAGC CGGGAAAAAG
AGAGCCACTG CCTTGGATCT TGCCACCATG TCGATCGGGC AAACCAATAA TGTGACGGCC
ATTCAGCTGC TTACGGCAGT TTCCGCAGTA GCTAACGGCG GGAACCTGAT GAAGCCCCAA
TTGGTTAAAG AGATCGTGGG ACCTTCGGGG AACGTGGTGG AATCCTTTGA ACCTCAGGAC
GTGCGGCGTG TGATCAGCGA GGGTACTTCG AAAACTGCCC GGCAGATGCT GGAGTCTGTG
GTCACCAACG GCACGGGTTA CCGGGCCTTT CTGCCCGGAT ACCGGGTGGC GGGCAAGACC
GGGACCGCCC AAAAAGTTGC CAATGGGGCG TACATACAAG GGGAATATAT TGCTTCCTTT
ATCGCCTTTG CTCCGGCCGA TAATCCCCAG CTGGCCATCC TTTGTGTGAT CGATGGTGTG
CCCTTTTACG GGGGATCTGT GGCGGCTCCG CCGGTGAGAG GGGTGCTGCA GGATTCTTTG
AAATACTTAG GTGTGGAAAT GGATCTGAAA GCCCCTCTGA CGCTGGGCAA ACCCCGCTTG
GATATGCAGA TACCTCCAGT GAAAAAAGCG GCAACGGTCC CCTCTGTTCT CGGGCTGACT
CTGGCCGAGG CCGAAAAGTC TCTGCGGCAA GCCGGTTTTA CCGTCCTGAC GGAGGGCAGT
GGAACGGTTG TTCAGGACCA AATTCCTCAT GGGGATTCTA AAGTGGAAGA GGGATCCTCG
GTGCTGCTCT ATCTTGGTTC CGAGGCGGGA GCACCCACTT CAGGCAACTG GTGGGCCGTG
GAAGAGGAAG TGGATATCGA CATAGAAACC ATGCTGCAAA TGCCCTGGCG GCAGCCCTTA
AGCCAATGA
|
|---|
| Protein sequence | MSPYVVMRKR IAFLFFCVSA FLVVLIVRLA FVQLAQGAIL SDKADESHYR GVPVAAKRGN
IEDRNGEVLA MSVSTETVYA VPAQVRSSGR AEEIAHALSG LLEMGPEQVM ERITKRSALE
YVKKRVTAEV AAQVRALELP GIGITEDSVR YYPNSTLAAH IIGFAGIDNQ GLEGIELTRD
SELNGVPGAV LTEFAANGIP LPFANQMYVS PKNGNTVRLT IDKNIQAFAE RELQKLMSGQ
GDNMNGQVPK SGTILVMDPN TGQVLALASA PTYDPNYYNN YDQSTRRNIA IQNGYEPGST
FKIITLAAAL EEKKISPQEG FFDPGGVTIL GKTVHCWKRG GHGSQTFTQV VENSCNPGFV
AMGQRLGMDK FYKYLHDFGF GQKTGIEMSG EAVGILAGKK RATALDLATM SIGQTNNVTA
IQLLTAVSAV ANGGNLMKPQ LVKEIVGPSG NVVESFEPQD VRRVISEGTS KTARQMLESV
VTNGTGYRAF LPGYRVAGKT GTAQKVANGA YIQGEYIASF IAFAPADNPQ LAILCVIDGV
PFYGGSVAAP PVRGVLQDSL KYLGVEMDLK APLTLGKPRL DMQIPPVKKA ATVPSVLGLT
LAEAEKSLRQ AGFTVLTEGS GTVVQDQIPH GDSKVEEGSS VLLYLGSEAG APTSGNWWAV
EEEVDIDIET MLQMPWRQPL SQ
|
|---|
| |