Gene Dhaf_3963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3963 
Symbol 
ID7260983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4206172 
End bp4206954 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content52% 
IMG OID643563884 
Producthypothetical protein 
Protein accessionYP_002460412 
Protein GI219669977 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGA AGAAGGGGAA TTGTAAGCTG CATAGGATGG GGGAACCCCA TGGCCCCAAG 
GTGCTTTTGA TCCATGGGGC GGGATTTTAT TGGCAAACCT GCTTTGCCAG GATCATAAGG
GACCTGAAAG ACCGGTATTG CCTCCTGATT CCGGAACTGG AAGGGCATAC CGCCCACCCC
AGGGAATACA TGGTCTCGGT GGAGGAAACG GCCGGCAAGC TTGGCGAAGC TTTAGAGGAA
CTTAGGGTTG ATAAGGTTCA GGCCATCTAC GGGGTTTCCC TGGGTGCCAG TGTAGCCGTA
GAAATGGCCA TCAGGGGTGA GATCAAGGTC ATGAACCTGC TCCTGGATGG GGGTCAATAT
GAAGGGATGG GGGAAATGAC GGAACAATAC GCCAATATCA TGGCCGATGC CTTTTTAAAC
CTGCTGGCCG GGGAGCACCT CCCATCCCCG GTCAAAGAAA ATATGGGCTT TGCCGCCAAC
AATGATGTTG AGGTTCTCCA ACCCCTCATT TATGAGCATA TAACCCGGGA AGCGCTGCTC
CATGCGCTTT TAGCCGCTTA CCGCTATGAT CTGAAAGCGA AAAACGCCAG GGTGGATGCC
CGTGTCTCTG TTCTGATCGG AGGCAATGAG ATCTATGGGG CCCAGTTCAC CCCCTTGTTG
GCAGAAATCA GCAGACATCC CCTTGATATC TATGAATTTC CCAACCGAGG GCATGCGGAA
GTGTTGAGCA AGGAGCCGGA GAAAATATCC CGGTTGATCA GGGAGATTTT GAATTATTGT
TGA
 
Protein sequence
MSMKKGNCKL HRMGEPHGPK VLLIHGAGFY WQTCFARIIR DLKDRYCLLI PELEGHTAHP 
REYMVSVEET AGKLGEALEE LRVDKVQAIY GVSLGASVAV EMAIRGEIKV MNLLLDGGQY
EGMGEMTEQY ANIMADAFLN LLAGEHLPSP VKENMGFAAN NDVEVLQPLI YEHITREALL
HALLAAYRYD LKAKNARVDA RVSVLIGGNE IYGAQFTPLL AEISRHPLDI YEFPNRGHAE
VLSKEPEKIS RLIREILNYC