Gene Dhaf_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3886 
Symbol 
ID7260907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp4120281 
End bp4120928 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content51% 
IMG OID643563810 
Productcobalamin B12-binding domain protein 
Protein accessionYP_002460338 
Protein GI219669903 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00000310147 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATT TAAATGCATT GACACAGGCC ATTGGGGATC TGGACGAAGG ACAAGTAGTA 
AGCTTACTGG AGGAATTTGT TGCCTCCAAG CCCAGTATGG CGGAGGCCAA CCAAGTGGTT 
GCAGCTTGTC AAAAAGGGAT GAGCATCGTC GGAGACTTTT ATGAAAAAAA GGAGTACTAT 
GTTGGTGACC TTATTTTCGC CGGTGAACTT TTAAGCGAGG CATTTGATCT TTTGAAACCT 
GTGATTGGCG GAGACAGCAA CAGCAAGGTG GGCAGCATCG TTGTCGGCAC GGTCCAGGGG 
GATATGCACC ATACTGGCAA AAACATCTTT GCCAGTATGG TGGAGGCGGC AGGTTTTGTC 
GTCCATGATC TGGGCATCGA TGTGGAGCCT GGGGTTTTTG TGGACAAGGT AAAAGAGGTG 
AAAGCAGAAA TACTGGGGAT GAGCGGAGTT CTTACCCTGG CCATTGATTC CATGAAAGCA 
ACCGTTGACG CTTTGGCAGC GGCGGGCCTG CGGGATCAGG TGAAGGTCAT CATCGGCGGC 
AACCCTGTCA CCGAGGAGGC CTGCAAACAG ATCGGAGCCG ATATGTTTAC AACCAATGCC 
GCCGAGGGCG TAAAAATTTG TCAGAGGTGG GTGGAACAAC ATGTCTGA
 
Protein sequence
MLDLNALTQA IGDLDEGQVV SLLEEFVASK PSMAEANQVV AACQKGMSIV GDFYEKKEYY 
VGDLIFAGEL LSEAFDLLKP VIGGDSNSKV GSIVVGTVQG DMHHTGKNIF ASMVEAAGFV 
VHDLGIDVEP GVFVDKVKEV KAEILGMSGV LTLAIDSMKA TVDALAAAGL RDQVKVIIGG 
NPVTEEACKQ IGADMFTTNA AEGVKICQRW VEQHV