Gene Dhaf_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3862 
Symbol 
ID7260883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp4101883 
End bp4102215 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content55% 
IMG OID643563786 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002460314 
Protein GI219669879 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACTT ACTATGAAGC AAAGGATCTG GAGAAATTCG CTACTATGGG AGAGTGTGCT 
TCCGAACTAT GGGAGAAGTT CATGGGCTAT TATGGCGCAG TCTTCGCCGA GGGGAATCTG
ACCGCCCGGG AAAAATCCCT GATCGCTCTG GCAGTGGCCA CAGCTGTCCA GTGCCCTTAC
TGCATTGACT CCTATACTCA GGACTGCCTG TCCAAGGGGG TCACAGAGGA GCAGATGACC
GAGGCTATCC ATGTTGCCTG CGCTATCCGG GGCGGAGCCA GCCTGGTCCA CGGGGTGCAG
ATGAAAAATA TCGTGAAGAA GCTGGAGCTC TAA
 
Protein sequence
MATYYEAKDL EKFATMGECA SELWEKFMGY YGAVFAEGNL TAREKSLIAL AVATAVQCPY 
CIDSYTQDCL SKGVTEEQMT EAIHVACAIR GGASLVHGVQ MKNIVKKLEL