| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3712 |
|---|
| Symbol | hslU |
|---|
| ID | 7260733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3942865 |
|---|
| End bp | 3944241 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643563636 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_002460164 |
|---|
| Protein GI | 219669729 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC TAACACCACG GGAAACTGTC CGGGAATTGG ATCGATACAT CGTAGGTCAG
AACCAAGCTA AGCGGGCAGT AGCCATAGCG CTCCGTAATC GCTACAGAAG ATCCTTACTC
CCCGAAGGGA TGCAGGAGGA AGTTCTCCCG AAGAATATCC TGATGATTGG TCCCACAGGG
GTTGGGAAAA CCGAGATTGC CAGACGTCTG GCTAAGCTGG TGCGGGCTCC TTTTCTTAAA
GTGGAAGCCA CAAAGTTCAC TGAAGTGGGC TATGTGGGAA GAGATGTGGA ATCCATCGTC
CGTGACTTAG TGGAAATTTC CTTGCGCATG GTTAAGGCGG AGAAGATGGA AGAAGTGGAG
ATTCAGGCTG CACAGGCTGC GGAAAAACGC CTTGAAGCCT TACTGGTTCC GGGGAAACGT
CAAGAAAATA ACTCGTCAAA CCCTTTCCAG TTCTTGTTTA ATCAAGGCCA GGAAAAGGAG
GAGACGGTAA CTCCCGAGAT TGAAAGGGAT CGGACCTTTA TTCGGGAACG CTTGCACCGC
GGGGAACTTG ATGAGCAGGT CATCGAGGTT GAGGTAGAGG ACAATCAACC CCTGCTGCCT
GATTTCTTAG GAACCGGCAT GGAGATCAAT ACGAATCTCC AGGATATGAT GGCAGGTATG
CTGCCTAAAA AGCGGCATAA ACGAAAAGTC ACCGTCCGCG AGGCCCGCCG TATCCTAACC
ACTGAAGAAG CCCAGAAGCT CATTGATCAT GATGAAGCGG TTCAAGAAGC AATTCGCCGA
GTTGAACAGG AAGGTATGGT TTTCCTCGAC GAAATCGATA AGATTGCCGG AAGAGATGGA
GCCTCGGGCC CCGATGTATC CAGGGGAGGT GTCCAAAGGG ACATACTGCC CATTGTCGAA
GGCTCTACCA TTAATACAAA ATACGGACCT GTCAAGACAG ATCACATCCT GTTTATTGCG
GCTGGTGCTT TCCATGTGGC CAAGCCATCA GACCTCATTC CCGAACTCCA GGGACGCTTT
CCTATTCGGG TTGAACTGGA ATCTCTGAGC ATTGAGGATT TCCAACGGAT TTTAACAGAA
CCTCAATCCT CATTGATAAA ACAGTACAGC GCCTTGCTGG AAACCGAAGG GATAAAGGTC
GAGTTTACAG AGAATGCTAT TGATGAATTA GCAAAAGTTG CCTATGAGGT GAATTCCAAC
ACGGAAAACA TCGGAGCCAG AAGGCTTCAT ACTATCGTGG AAAGAGTCTT GGAGGAATTG
TCCTTCGAAG CCTCGGAGCT GCCGGAAGAT TATACGGTCA CGATTAATCG GGAATATATT
CAACACCGAC TTGGCAATAT CGTGAGGAAC CAAGATCTTT CCAGGTATAT CCTTTAA
|
|---|
| Protein sequence | MEQLTPRETV RELDRYIVGQ NQAKRAVAIA LRNRYRRSLL PEGMQEEVLP KNILMIGPTG
VGKTEIARRL AKLVRAPFLK VEATKFTEVG YVGRDVESIV RDLVEISLRM VKAEKMEEVE
IQAAQAAEKR LEALLVPGKR QENNSSNPFQ FLFNQGQEKE ETVTPEIERD RTFIRERLHR
GELDEQVIEV EVEDNQPLLP DFLGTGMEIN TNLQDMMAGM LPKKRHKRKV TVREARRILT
TEEAQKLIDH DEAVQEAIRR VEQEGMVFLD EIDKIAGRDG ASGPDVSRGG VQRDILPIVE
GSTINTKYGP VKTDHILFIA AGAFHVAKPS DLIPELQGRF PIRVELESLS IEDFQRILTE
PQSSLIKQYS ALLETEGIKV EFTENAIDEL AKVAYEVNSN TENIGARRLH TIVERVLEEL
SFEASELPED YTVTINREYI QHRLGNIVRN QDLSRYIL
|
|---|
| |