Gene Dhaf_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3579 
SymbolmnmA 
ID7260597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand- 
Start bp3802251 
End bp3803363 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content51% 
IMG OID643563501 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002460032 
Protein GI219669597 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.93999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTTA CCGAAAAGAA AAAGGTAGTG GTCGGCATGA GCGGCGGTGT GGACAGTTCC 
ATGGCCGCCG CTTTGCTTAA AGAAGAAGGT TATGAGGTCA TTGGCATAAC CCTCCAAACC 
ATGCCCTCCG GCGGCCCGGA TGATGTGGGA GGGTGCTGTT CCATTACCGC CATCGATGAT 
GCCCGGCGGG TAGCTCATCA ATTGGGCATA CCTCATTATG TTCTGAACTT TCGTACTATC 
TTTGAGGAGA ATGTCATCGA TTATTTTACC AACGCTTACC TCAGCGGTGA AACGCCTAAT 
CCCTGTACCA TGTGCAATCG GGTTGTACGC TGGGGAGAGT TTTTGCGGAA AGCCCGGGCT 
TTGGGGGCCG ATTATCTGGC CACAGGCCAT TATGCTAAAA TTCTTCAGGA CCCGGATAGC 
GGGCGTTACT TGATGAGCCG GCCGGTGGAT ACATGGAAGG ACCAAACCTA TATGCTTTAC 
AACCTGACTC AGGACCAGCT CAAGCACACC TTGTTTCCCC TGGCAGACTA TAAGAAAGAA 
CATATTCGCG AGATGGCCGC TGAGCGGGGG TTGCTCCGGG TCTCCCGGAA GCCTGATAGT 
CAGGAAATAT GCTTTATCCC CGATGATGAT TATGTCTCTT TCATTCGCGA GCGGTCTCCG 
GACAAGATTA AGCCGGGGAA TTTTGTTGAT CGTCAAGGCA ATATTCTGGG GCGGCACCAA 
GGCCTGATCA ACTATACCGT CGGCCAACGG AAAGGTTTGG GAGTAACTTT TGGTAAACCC 
ATGTTTGTCC TCGGCTTTAA TGTGGAAGGC AATGAAGTGA TCTTAGGTGA GGATCAAGAG 
GTATATGCCC ATACTCTTCT GGCCACAGAT TTAAATTGGA TAGCCATTAC CGGGCTGGAG 
GGGCCCTTGA CAGTCCAAGC GAAAATTCGT TATAAGGCGC CTCTCGCTGA AGCGAAAATT 
ATCCCCCTCA AGGATTCTGA AACATTGCCC GGAGCCATCG GCCCTGTAGT ACGGGTAGAA 
TTCACCACTC CGCAACGGGC TATTACTCCA GGGCAAGCCG TAGTCTTCTA CCAAGGGGAT 
CTCGTTGTAG GCGGCGGCAA AATCATCACG TGA
 
Protein sequence
MTLTEKKKVV VGMSGGVDSS MAAALLKEEG YEVIGITLQT MPSGGPDDVG GCCSITAIDD 
ARRVAHQLGI PHYVLNFRTI FEENVIDYFT NAYLSGETPN PCTMCNRVVR WGEFLRKARA 
LGADYLATGH YAKILQDPDS GRYLMSRPVD TWKDQTYMLY NLTQDQLKHT LFPLADYKKE 
HIREMAAERG LLRVSRKPDS QEICFIPDDD YVSFIRERSP DKIKPGNFVD RQGNILGRHQ 
GLINYTVGQR KGLGVTFGKP MFVLGFNVEG NEVILGEDQE VYAHTLLATD LNWIAITGLE 
GPLTVQAKIR YKAPLAEAKI IPLKDSETLP GAIGPVVRVE FTTPQRAITP GQAVVFYQGD 
LVVGGGKIIT