| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3562 |
|---|
| Symbol | |
|---|
| ID | 7260580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3785713 |
|---|
| End bp | 3786141 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643563485 |
|---|
| Product | Holliday junction resolvase-like protein |
|---|
| Protein accession | YP_002460016 |
|---|
| Protein GI | 219669581 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
|---|
| TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000000000329746 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATTA TGGGTCTGGA CTTTGGTGAA CGGACCATCG GAGTGGCAGT GAGTGATGCT
ATGCTCCTTA CCGCCCAGGG GGTAAAGACC ATCCGCCGCT CCCCAAAAGA GCTTGAGGAG
CTAAAGACCA TGCTTCAGGA CTATGAGGTA GACCACATTG TCTTGGGTTA TCCGAAAAAT
ATGAATGGTA CGCTGGGGCC TCGTGCCCAG GCCACCGAGG AATTTGCCCA GATTCTTAAA
GAGGAATTTG GGTTGCCGGT CACTCTATGG GATGAGCGTT TAAGCACCAT GGGGGCCCAG
CGCTCTTTGC TGGAAGCAGA TGTATCACGG GCCAAACGCA AGCAAGTGAT CGATAAGATG
GCAGCCGTCT TTATTTTACA GGGGTACCTG GATTATATAA GGCAAAAAAA TGGGCAGAAT
AAGGAATAG
|
|---|
| Protein sequence | MRIMGLDFGE RTIGVAVSDA MLLTAQGVKT IRRSPKELEE LKTMLQDYEV DHIVLGYPKN
MNGTLGPRAQ ATEEFAQILK EEFGLPVTLW DERLSTMGAQ RSLLEADVSR AKRKQVIDKM
AAVFILQGYL DYIRQKNGQN KE
|
|---|
| |