Gene Dhaf_3456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3456 
Symbol 
ID7260474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3689915 
End bp3691153 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content51% 
IMG OID643563379 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002459910 
Protein GI219669475 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000737722 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATT TTCTCTTGAC CTCAGAGCAA AAGCTCCTGC AAGAAGAGGC GGCGCGCTTT 
GTCAAAGAAA AGGTACCCAA ACAGCTGATC TTAGCGATGG ATGAAGAAAA GGTGATCTAT
CCCAAAGAGT ACTTAATGGA CCTGGGTCAG GCCAGACTTC TGGGGTTGCG CTTTGCTGAG
CGGTACAGCG GACGAGGGCT GCAATGGGTG GATGAAGTTT CAGTTCTCGA AGAGATCGGG
GTTTTGGGTA CGAGTTTGGC GTGCCTTTAT TCCTTACCTT CCATCGTCGG CGAAGCCATT
AATCATTTTG GCTCAGAGGT GCTGAAAGAT CGTTATTTAA AGCCTACTTT AGAAGGAAAG
CTGTACACTG CTGAAGCATT GACTGAGCCG AGAGGAGGAT CGGATTTTTT TGGGGCAACG
ACTTTAGCCC GGCGTGAGGG GGATGTCTAT ATTCTCAATG GGCAAAAGCG TTTTGTGGTG
GGAGCAGAGG GGGCCGACTA TTTTATGGTT TATGCCAAGA CCGATCCGGA AGGACCTGCC
CATCAGAGTA TCAGTGCCTT TATCGTAGAC CGTGGTCCCG GAGTGGAAGT GGAACATATC
TACGGCTTAA TGGGAACCCG TGGAGGCGGG GCAGGCCGGG TAGTTTTCAA GGATGTAAAA
GTTCCTGCCG AAAACCTTCT CGGTGTGGAA AACGGTGCGG CAGACATTTT TTATCAGATG
ATGATCCCGG AACGGTTAAC CAGTGCCGCG GGAGCTTTGG GGATGGCCCG GGCGGCTCTG
GAAGTAGCTT CTGATTACAG CACCAGGCGC AAAGCTTTTG GCAGAAAAAT TAAAGATTTT
CAAGGGGTCA ACTTTAAAGT GGCTGACTCG ATCACCCGCC TGGATGCAGC CCGCTCACTT
GTTTATACCA CCGCCCGGGC CGTGGATTCT GGAGTGCCGG GCCATGTGGC ACGCCGTTTG
GTCTCCGAGG CGAAAAAGTT CGCCACGGAT TCGGCCTGGG CAGTGGTCAA CGATGGGATG
CAGATCATGG GGGGGATTGG TTATACCAAT GTCTTCCCCA TCGAGCGATT GCTGCGGGAT
ATCCGTCTCA TCATGATTTG GACCGGTACC AATGAAGTGA TGAATCTCAT TATCCAACAT
GAGTATTACA AAGAACGCCG GGGGAATTTA CAATTCCATC GCTCCCTAGA AGAAGATGCG
GTGAATGCTC ATTTGACGGA GGAAAAAGTA TATGAGTAG
 
Protein sequence
MFDFLLTSEQ KLLQEEAARF VKEKVPKQLI LAMDEEKVIY PKEYLMDLGQ ARLLGLRFAE 
RYSGRGLQWV DEVSVLEEIG VLGTSLACLY SLPSIVGEAI NHFGSEVLKD RYLKPTLEGK
LYTAEALTEP RGGSDFFGAT TLARREGDVY ILNGQKRFVV GAEGADYFMV YAKTDPEGPA
HQSISAFIVD RGPGVEVEHI YGLMGTRGGG AGRVVFKDVK VPAENLLGVE NGAADIFYQM
MIPERLTSAA GALGMARAAL EVASDYSTRR KAFGRKIKDF QGVNFKVADS ITRLDAARSL
VYTTARAVDS GVPGHVARRL VSEAKKFATD SAWAVVNDGM QIMGGIGYTN VFPIERLLRD
IRLIMIWTGT NEVMNLIIQH EYYKERRGNL QFHRSLEEDA VNAHLTEEKV YE