Gene Dhaf_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3414 
Symbol 
ID7260432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3650360 
End bp3650899 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content49% 
IMG OID643563337 
Productnucleoside recognition domain protein 
Protein accessionYP_002459868 
Protein GI219669433 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones88 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTTA TTGCAGAAAT CTCCCGTTGG GCCATTCCTT TGCTGCTTTT GTTTATCCCT 
TTAATTGCTT TTCTGCGCGG AGTACCTGTG TATGAATCTT TCGTCACAGG AGCGGAAGAG
GGCTTTAAAA CGGCCATCAA AATTCTGCCT TTTCTGGTGG GGATGCTGGT CTCCATCCGT
ATTTTTGTGG ATTCAGGTGC CTTAGAGATT CTGGCCGGAT TATTGCAGCC CATCTTTACG
ATCTTTGGCC TGGATTCCGA GCTCACGGCG ATTATACCTC TGGCGGTCAT GCGCCCCCTA
AGTGGTTCAG GAGCTTTGGG AGTGGCGACT CAATTGATCA ATCAGTATGG ACCGGACTCC
TTCATTGGCC GTTTAGCCTC CACACTGCAG GGGAGTACGG ACACCACCTT TTTTGTCCTG
ACCGTCTATT TCGGTTCGGT AGGAATCAAA AAATACCGCT ATGCTTTGAA GCTGGGCCTC
ATGGCGGATC TGATCGGACT GATCGCTTCT CTGTGGATTG TCCATAGGAT GTTTTATTAA
 
Protein sequence
MSFIAEISRW AIPLLLLFIP LIAFLRGVPV YESFVTGAEE GFKTAIKILP FLVGMLVSIR 
IFVDSGALEI LAGLLQPIFT IFGLDSELTA IIPLAVMRPL SGSGALGVAT QLINQYGPDS
FIGRLASTLQ GSTDTTFFVL TVYFGSVGIK KYRYALKLGL MADLIGLIAS LWIVHRMFY