Gene Dhaf_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3297 
Symbol 
ID7260313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3528665 
End bp3530248 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content62% 
IMG OID643563218 
Productputative ABC transporter 
Protein accessionYP_002459751 
Protein GI219669316 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3559] Putative exporter of polyketide antibiotics 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGTT ACTTTCAGGG TACGGCGGCC ATCATGACAC TGTCTATGCG GCAGAACCGG 
GTTTTCACGC TGGCCTGGCT GCTGCTGCCG GGGCTGTGGG TCGCTATCAA CACCCTCTCT
TCATTGGTGC TCTTCCCCAC CCAGGAGGCC CTCGCCGAGA TGGGCGTCAC GCTGATCGAC
CCGCTCACCG TGGCTATACA CGGCCCGCTG CTGGACGTCT CGGTGGCCGG ATTTGTCACT
TGGCGCACCA AGGTCTTTCT GGTTCTGGCA AGCGGGATCT TCAGCATGAT CTATGTGGTG
CGGCACACCC GGCTGGCCGA GGAGCAGGGC AAGCGGGAGC TGCTTGAGGC CAATGTGACC
GGCAGTCTTG CGGCCTTGGC GGCAGCGCTG CTGAACATGC TGCTGATCAA CGCAGCAGCG
GCCCTCCTTG CCCTGCTCGG GATGACGGCT CTGGGGCTTG GTTTCACAGG ATCGCTGGCC
CACTGTCTTG GCTTTTTGGC CGCCGCCTCC GCGTTAGGCC TGATGGCGGG CCTGGTCGCC
CAGTTCTTTG TGGGGGCCTC GGCGGCGCGG GGAACCTCTT TCGGGTGTTT GGGGCTGCTG
TTTGCCCTGC ATATCCTCTG GAACGTGAGC GGGGGAAACC ATCCCGCCGC CTATCTCAAC
CCTCTGGAAT GGCCGCTTCT GATCCGGCCC TTTGCCGGGG AGCGCTTCAG CGTCCTGCTG
ATTTCCCTGA TCATCATGAT CCTGCCGGCG GCCCTCTCCC TGTGGATGAC CCACAAACGG
GACGTGGGAG CGGGGCTTAT CCCCCAGCGG GAAGGACGCG CCTTCGCCAA GCCTGGCTTC
TGCTCCCTGC CCGCTTTGGC ATGGCGTACC CAAAAGGGAC TCTTCCTCTC CTGGCTGATT
TTTTACGCGG TGTTCTCCTT CGCTCTGGGC TGTGCCAGCT ACCTGATGGT AAGCGCAGTC
AGTTCGGCCA AGACGCTGGC TGAGCTGATC GCGCGCCTGG GCGGCGTGGA CCGTGCCTTC
ATGTCACTGA TGCTGTATAT TGTTTCCATG CTCATTTCAG TCTACGTGCT GATGTCGGCG
GGTATCCTGC GCCGGGAGGA GACGGCCAAA GGTGAACTGC TGCTCTCCCT GCCTGTCCGG
CGCAGCCGCT TTGCCTTCGG GCATCTGGTG TATATCTTCG GCGGCTCCGC TGCTCTCGCT
CTGGTTTCCG GCCTTTGTGC GGGACTGGGG GCGATGATCG GCACCGGGGA TCAAAGCGCT
CTTGTCCGCT TGTTTTTCGA GATGGCAGGA AAGATACCGG CGATTTGGGC TTTCGGCGGG
ATTTCGATGC TGCTGTTTGG CGTACTGCCC CATTGGATGT CCGGGCTCAG CTATGGACTC
ATGGTGCTGT TTGTGTTATT GGAGATCCTC TGGGAACAGC AGTCGGTGAG CGATGCCGTG
TATGCCCTCT CCCCCTTCTC CTGGGTGACC CCGCTCAAAG TCGCCCAGCC GCCGTCGGTG
CTTGTGCTGC TATGCGCCCT GTCAATGCTG TCGGCCGTTT TGGGGATCGT CTTGTTTGAG
CGCAGAGATG CCGCCATGCA TTGA
 
Protein sequence
MKRYFQGTAA IMTLSMRQNR VFTLAWLLLP GLWVAINTLS SLVLFPTQEA LAEMGVTLID 
PLTVAIHGPL LDVSVAGFVT WRTKVFLVLA SGIFSMIYVV RHTRLAEEQG KRELLEANVT
GSLAALAAAL LNMLLINAAA ALLALLGMTA LGLGFTGSLA HCLGFLAAAS ALGLMAGLVA
QFFVGASAAR GTSFGCLGLL FALHILWNVS GGNHPAAYLN PLEWPLLIRP FAGERFSVLL
ISLIIMILPA ALSLWMTHKR DVGAGLIPQR EGRAFAKPGF CSLPALAWRT QKGLFLSWLI
FYAVFSFALG CASYLMVSAV SSAKTLAELI ARLGGVDRAF MSLMLYIVSM LISVYVLMSA
GILRREETAK GELLLSLPVR RSRFAFGHLV YIFGGSAALA LVSGLCAGLG AMIGTGDQSA
LVRLFFEMAG KIPAIWAFGG ISMLLFGVLP HWMSGLSYGL MVLFVLLEIL WEQQSVSDAV
YALSPFSWVT PLKVAQPPSV LVLLCALSML SAVLGIVLFE RRDAAMH