| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_3104 |
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| Symbol | |
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| ID | 7260115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3319286 |
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| End bp | 3320836 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643563024 |
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| Product | phosphodiesterase |
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| Protein accession | YP_002459563 |
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| Protein GI | 219669128 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000128005 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAACTAA CTGAATTAAT CTTTATTGTT GTAGCAGTCG TGGTATCCCT TTTTGTGGGT
GGTTTTATAG GTTGGCTTAT TCGTAAGAGT GCCGCGGAAA AGCTCATCGG CTCAGCTGAA
GAAGAGGCAA AACGGGTCAT CGACAATGCT CAGGGTGCCG CTGAGGCTAA ACGCCGTGAA
GCTGTCATTG CCGCTAAAGA AGAAGTCATG CATATCCGCA ATGAAGTGGA AAAAGAATCA
CGGGAACGCC GCAACGAGAT TCAGCGGATG GAGAGACGGG TTATTCAAAA AGAAGAGTCT
TTAGACCGCA AAATGGAGTC TTTGGAGCGC AAGGAAGATA ATCTTCATCG TAAAGAAGAA
GAAGTGGATC AGCTCAAAGA GGTCCTGACG CAAACTGTAG CCAAAGAAAA ACAAGAATTA
GAACGGGTCT CTGGTTTATC CACTGAAGAA GCGAAGCAAA TTCTGCTGCA AAGTGTGGAA
GAAGAAGTTC GTTACGAATC CGCTATTATG ATTAAAGATA TTGAGACGAA GGCTAAGGAA
GAAGCAGAGA AGCGGGCTAA GAACATTATC TCTTTGGCAA TTCAGCGTTG TGCTGCGGAT
CACGTCGCCG AGAGCACGGT GTCTGTGGTG GCCCTGCCCA GTGATGAGAT GAAGGGACGC
ATTATCGGAC GGGAAGGACG CAATATTCGG ACTCTGGAGA CCTTAACAGG TATCGATCTG
ATTATTGATG ATACTCCCGA AGCGGTCATT CTCTCTGGGT TTGACCCCAT CCGCAGAGAA
GTTGCCCGGG TTGCCCTGGA AAAACTGATT GCCGATGGAC GGATTCACCC GGCTCGCATC
GAAGAAATGG TTGAGAAATC TCAAAAAGAG GTGGATCAGC GTATTCGTGA AGAAGGAGAG
CAAGCTACCT TTGAAACCGG AGTGCATGGC TTACATCCTG AAATCATTCG CCTCTTAGGA
CGATTGAAGT TTAGAACCAG TTATGGTCAA AATGTCCTCA AGCATTCTAT GGAGGTATCC
CATTTGGCAG GTTTAATGGC CGCCGAACTG GGGGTCGATG TACAGCTGGC CAAGCGGGCA
GGTTTGCTGC ATGACTTAGG CAAAGCTGTG GATCACGATA CTGAAGGGAC TCATGTTCAG
ATCGGTGTCG ATCTAGCGAA GAAGTATAAG GAATCTTGGG AAGTTATTCA TGCTATTGAA
GCTCATCATG GTGATGTTGA AGCGAAGACC ATCGAAGCAG TCTTAGTGGC TGCCGCCGAC
GCAGTCTCAG CTGCTCGCCC AGGAGCTCGC CGTGAGACTC TCGAATCCTA TATCAAGCGC
CTGCAGAAGC TGGAAGAGAT TGCCGACACC TATGATGGTG TGGAAAAATC CTACGCGATT
CAAGCAGGAC GTGAGATTCG AATCATCGTC AGACCAGATA AGATCGATGA TGTTCTGGCT
CCGAAAGTGG CTCGGGAAAT CAGTAAACGC ATTGAGGATG AATTAGAATA TCCAGGTCAA
ATCAAGGTTG TCGTCATTCG TGAAACTCGT GCCGTGGATT ATGCCAAATA A
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| Protein sequence | MELTELIFIV VAVVVSLFVG GFIGWLIRKS AAEKLIGSAE EEAKRVIDNA QGAAEAKRRE
AVIAAKEEVM HIRNEVEKES RERRNEIQRM ERRVIQKEES LDRKMESLER KEDNLHRKEE
EVDQLKEVLT QTVAKEKQEL ERVSGLSTEE AKQILLQSVE EEVRYESAIM IKDIETKAKE
EAEKRAKNII SLAIQRCAAD HVAESTVSVV ALPSDEMKGR IIGREGRNIR TLETLTGIDL
IIDDTPEAVI LSGFDPIRRE VARVALEKLI ADGRIHPARI EEMVEKSQKE VDQRIREEGE
QATFETGVHG LHPEIIRLLG RLKFRTSYGQ NVLKHSMEVS HLAGLMAAEL GVDVQLAKRA
GLLHDLGKAV DHDTEGTHVQ IGVDLAKKYK ESWEVIHAIE AHHGDVEAKT IEAVLVAAAD
AVSAARPGAR RETLESYIKR LQKLEEIADT YDGVEKSYAI QAGREIRIIV RPDKIDDVLA
PKVAREISKR IEDELEYPGQ IKVVVIRETR AVDYAK
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