Gene Dhaf_3004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_3004 
Symbol 
ID7260014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3224600 
End bp3225979 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content47% 
IMG OID643562923 
ProductSpoVR family protein 
Protein accessionYP_002459463 
Protein GI219669028 
COG category[S] Function unknown 
COG ID[COG2719] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTATG AGGTGACAGA ACTCAGCTAT TATGCTCAAG AAATTGCCAA GGTGGCCAGA 
GGCCTGGGGC TTGACTTTTA TCCAGTGCAT TTTGAGGTCT GCCCGGCTGA AGCGATTTAT
TCTTTTGGGG CTTATGGGAT GCCGGTGCGT TTCACACATT GGAGCTTTGG CAAGGCTTTC
TATCGTATGA AAATGCAGTA TGATTTGAAT CTCACCCGGA TCTACGAACT CGTCATCAAC
TCGAATCCAT CTTATGCGTT TCTGTTGGAA GGGAATCGCT TAATCCAGAA CAAGCTGGTC
ATAGGCCATG TCTATGCTCA TGTGGATTTT TTTAAGCATA ACCGCTATTT CCGACGAACC
CCTCAGGACA TGGTGCTGCG CATGGAAGCT CATGCCCGGC GCATGCGGGA CTACGAACTG
GAGCATGGCC GGGATAAGGT GGAACAAACC TTAGATGCGG TATTAGCCAT CCAAGAGCAT
GTGGATTTCA GAGCCCATTT AGGGCCTCAA AAAAGCTCTG CCGAAGACTC CAACAAAAAA
GGCGGAGCGC AAAAGAAAAT TTCCGTCCAC CTAACTGAAT ATGCAGATCT TTGGGATAGA
GAAACTGATG ATGAAGCTGA GGAAAGATTA CCGGAAGAAG ACCTGCTGCT TTATTTAATG
ACTCACTCTT CAAGCCTGGA AGATTGGCAG CGGGATATAT TGAGTATGAT CCGTGAAGAA
TCCCTATACT TTTATCCCCA GATCGAAACA AAAATCATCA ATGAAGGGTG GGCCACCTTT
TGGCATTCAC GAATTATGAG AGAACTGGAC CTCACTGACG CCGAGGCGGT AGACTTTGCC
GTAATGCACA GTCAAGTCGT ACAGCCTGCA AAGCTGCAGC TCAATCCCTA TTACTTAGGC
GTTAAGATAT GGGACCATCT TGCTGAGCAT TATGACTGGG AAACTTTGTT TGAAATACGA
GAGATGGAGA ATGACATTTC CTTTGTGCGC AATTATCTCA ATCAAGAACT GGTTGAGGAA
CTCAACCTCT TTAATTATCG TAAGGTAGGT GCCCACTGGC AAGTCATGGA TACCGCCTGG
GAGAAGGTGC GCGATAACCT GGTTAAGCAG CTGGTCCATG GCGGCCATCC CCGTATTTTA
GTCATGGATG GGGATTACGA GGGAAAAGGC GGGCTCTATC TTGTTCATGG TCATGAGGGA
CTCGACTTGG ACATTGTTTA TCTGGAAAGA ACTTTGCAGC TGCTGCAGAC ATTGTGGGGC
AAAGGTGTTT ATCTGGAAAC TGTGGTGGAT GGCAAAAAGA TTCTTTTCGA ATGCACGAGC
AGCGGTATTT CCCGGAAGAG CATGGCAAAA GTTCAGGATA GGCAGAAAGA GGAACAATAA
 
Protein sequence
MDYEVTELSY YAQEIAKVAR GLGLDFYPVH FEVCPAEAIY SFGAYGMPVR FTHWSFGKAF 
YRMKMQYDLN LTRIYELVIN SNPSYAFLLE GNRLIQNKLV IGHVYAHVDF FKHNRYFRRT
PQDMVLRMEA HARRMRDYEL EHGRDKVEQT LDAVLAIQEH VDFRAHLGPQ KSSAEDSNKK
GGAQKKISVH LTEYADLWDR ETDDEAEERL PEEDLLLYLM THSSSLEDWQ RDILSMIREE
SLYFYPQIET KIINEGWATF WHSRIMRELD LTDAEAVDFA VMHSQVVQPA KLQLNPYYLG
VKIWDHLAEH YDWETLFEIR EMENDISFVR NYLNQELVEE LNLFNYRKVG AHWQVMDTAW
EKVRDNLVKQ LVHGGHPRIL VMDGDYEGKG GLYLVHGHEG LDLDIVYLER TLQLLQTLWG
KGVYLETVVD GKKILFECTS SGISRKSMAK VQDRQKEEQ