| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2971 |
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| Symbol | |
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| ID | 7259980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3191108 |
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| End bp | 3192505 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643562890 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002459430 |
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| Protein GI | 219668995 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000487138 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGACAAC AGCCAAAAAG GGTGGAGATA AGGGATAGTA GGCGCATAGA AGAAGAACTT
AAAGTGCTCT ACAATTCGAT TCAAGAAGCC ATTGAGGTCG CAGGCAAAGA CGGAACCATT
CAATATGTCA ACCCGTATTT CAGCCGTTTA ACAGGCATAT CTCCTTATGA ACGAATCGGT
AAGAACATCT TCGAACTCTC ACCGGAGGGG GCACTGGCAA GAGTACTGAG GACCCATGAA
CCAATCTATG CACATCGTTC CACGATGGAA GAGTGTGATA TCGAAATCAT TGCCAATGCA
TACCCCATTG TCATCGAAGG TAATATCGAA GCGGCCCTGG TGGTGTTTCA GCAACTAACG
GAGACCTCCA GGCTGGGCGA AGAGATCGAA GCGGCGAAAC AGATGATTCA AGCTCTTACA
ACCCGGGTCG ATCAGATGGC ATCCAGCTCG TATACTTTTG ACGATGTTCT AGGGAGCCAC
CCGGATTTTG CTTTTATTCG CAATAAGGCG CGTCGCTCGG CCGAGACCCA TTCACCCATT
ATGATCATGG GTGAAAGCGG TTCTGGAAAA GAGCTCTTTG CTCATGCCAT TCATAGTGGC
AGCACGCGCA GCCATAAACC TTTTTTGAAA GTGGATTGTG CCAATATACC GGAAAGCCTT
CTTGAAGTTG AGTTGCTGGG TTACGAGAAG AAAAGCCAGG ATAGGGCTTC CGAGCGGAAG
TTGGGCAAAT TGGAATGTGC CAGTGGGGGA ACTCTGTTCC TTGATGAAAT AGGGCTGCTT
AATGACTATT TACAAGATAA ATTGCTTCAT ATCCTTCTGG AGAAGAAGTT CCAACCTGTT
GACGGAACCC AGGTGATTGA ACTGGATATT CGGATTATCA CGGCAACTAA CCGCGATTTA
AGAACTATGG TGGAGAATGG GCAGTTCTCA CCGGATTTGT ATCATCTGCT CGGTGGTATT
GAAATCCAAA TACCCCCTTT AAGAATGCAT AAAGAAGATG CCTTGACTTA CGCCCAGAGT
TTTATCTATA AGGCCAATCG GAAGCTGGGC AAACATGTGA TTGGCATAAC GACTCAGGCA
GAGCAGCTTT TATTGGATTA CCACTGGCCG GGAAACATCC GTGAGTTGAG AAATGTCATC
GAGATGGCGA TGGATTCCGT GGAAGGAGAT ATGCTCAATA TTAAGGATTT TGCCAGTTTG
GTAGAGATTG TCAATAAGAC GGAAGAGATT CATTATCGTG AGCCTATGGC CCTTGATGAA
TTAGAAAAGA GGATGATTCG CTTGGCATTA GACCGCTATG GCAATTCCGT GGAAGGGAAA
AAGCGGGCAG CTGGTGTCCT CAATATCTCC TTAGCTACTC TCTATAATAA GCTGAAAACC
CTCGAGGATA ATGTTTAA
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| Protein sequence | MGQQPKRVEI RDSRRIEEEL KVLYNSIQEA IEVAGKDGTI QYVNPYFSRL TGISPYERIG
KNIFELSPEG ALARVLRTHE PIYAHRSTME ECDIEIIANA YPIVIEGNIE AALVVFQQLT
ETSRLGEEIE AAKQMIQALT TRVDQMASSS YTFDDVLGSH PDFAFIRNKA RRSAETHSPI
MIMGESGSGK ELFAHAIHSG STRSHKPFLK VDCANIPESL LEVELLGYEK KSQDRASERK
LGKLECASGG TLFLDEIGLL NDYLQDKLLH ILLEKKFQPV DGTQVIELDI RIITATNRDL
RTMVENGQFS PDLYHLLGGI EIQIPPLRMH KEDALTYAQS FIYKANRKLG KHVIGITTQA
EQLLLDYHWP GNIRELRNVI EMAMDSVEGD MLNIKDFASL VEIVNKTEEI HYREPMALDE
LEKRMIRLAL DRYGNSVEGK KRAAGVLNIS LATLYNKLKT LEDNV
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