| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2889 |
|---|
| Symbol | |
|---|
| ID | 7259897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3098514 |
|---|
| End bp | 3100022 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643562807 |
|---|
| Product | Carboxypeptidase Taq |
|---|
| Protein accession | YP_002459348 |
|---|
| Protein GI | 219668913 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2317] Zn-dependent carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA AAGCAATTGT GGAAATTGAA GAATTGAAAG AATATCTTAA AAAAGTAGAG
TATCTGAGCA GTTCTATTTC ATTATTGCAT TGGGATAGCG TTGTTAATAT GCCCAAAGAG
GCAATTGAAT ACAGAAGCGA AATGATTGGA TACTTAACAG GGGAGAGTTA CAAGCTTACT
ACATCGGAAA AAATGAAAGA GTTTATCGAT TATTTTAATG GAATTAATGA TTTAGACGAT
TTAACCAAAG CCATAATAGA AAATATAACG AAAGATTATA ACAACGCAAC GAAAATACCG
GAAGCGGAAT ACGTTCAATA TGAAATTGAT AAGGCGCTCT CCCAAAGTGC GTGGGAGGAA
GCGAAAAAGA AAAAGGACTT TTCGATTTTC AAGCCGCACC TTGCTAAGAT TATCGCTTAT
AATAAAAAGT TCTCGGAATA CTGGGGTTTT GCCGGCAATA AGTATGATGG TCTTTTAGAT
ATTTATGAGC CCGGAATGAC AACAGAAAGG CTTGATGCAG TATTTGGAGA GTTGAGAGAA
TCCCTCGTTT ATTTACTGCA AAGAATTAAA AACTCGAATG TCAAAACGGA TGATGCTTTT
TTAAAAGGAA ATTACTCGGT TGAAAGCCAG AGAAAGCTAG GGGAAACCAT TTTAGGCCAG
ATCGGTTATG ATTACGAAAA AAGAGGAAGA ATCGATATCT CTGAGCACCC GTTTACGACG
AACTTTGGGA ATAAGGATGT CAGGATAACC ACAAAATACG ATACCTCGGA TTTCAGGCCT
GCAATCTTCT CTATGATTCA CGAGGGCGGC CATGGAATCT ATGAACAAAA TATTCCGGAC
GAACTTGAGG GAACTTCTTT AGGTTCAGGC GCATCAATGG GTATGCACGA ATCGCAATCC
CGGTTTTATG AAAATATCCT TGGGAAAAGC ATGGAGTTTT GGAGCTATTT TTATCCGAAA
TTTCAAAAAA CCTATCAAGA CCTCGAAGGG GTGGACTTTA TATCGTTTTA CCGGGCCGTC
AACTGCGTGG AGCCATCTTT AATTCGGATT GACGCAGATG AATTGACTTA TAGTCTTCAT
ATCATCATTC GCTATGAAAT GGAAAAGCTC CTGATAAACA GTGATATTGA CATTGATGAC
GTTCCGAGGC TTTGGAATGA AAAATATAAA GAGTATCTGG GTGTGGAACC GGAAAACGAT
GCGGACGGAG TATTGCAGGA CGTTCATTGG TCCGGCGGTG ATTTTGGGTA TTTTCCAACC
TATGCACTCG GAAACTTGTA TGGGGCCCAA ATTTTCAATA AGCTGAAAGA GGAAATTCCA
GATTGGAATC AAAAAATCTA CAGCGGAGAC TTTTTGTCTA TTACGAAATG GTTAAAGGAA
AATGTTCATC AGTATGGTGC AACATTAAAG CCGACGGAAT TAATCAAGAA AATTACGGGT
GAGGAACTGA GTGCAAAATA CTTTATAGAG TATCTCAACG ATAAATTCGG CAAGTTATAT
GGTGTATAA
|
|---|
| Protein sequence | MNKKAIVEIE ELKEYLKKVE YLSSSISLLH WDSVVNMPKE AIEYRSEMIG YLTGESYKLT
TSEKMKEFID YFNGINDLDD LTKAIIENIT KDYNNATKIP EAEYVQYEID KALSQSAWEE
AKKKKDFSIF KPHLAKIIAY NKKFSEYWGF AGNKYDGLLD IYEPGMTTER LDAVFGELRE
SLVYLLQRIK NSNVKTDDAF LKGNYSVESQ RKLGETILGQ IGYDYEKRGR IDISEHPFTT
NFGNKDVRIT TKYDTSDFRP AIFSMIHEGG HGIYEQNIPD ELEGTSLGSG ASMGMHESQS
RFYENILGKS MEFWSYFYPK FQKTYQDLEG VDFISFYRAV NCVEPSLIRI DADELTYSLH
IIIRYEMEKL LINSDIDIDD VPRLWNEKYK EYLGVEPEND ADGVLQDVHW SGGDFGYFPT
YALGNLYGAQ IFNKLKEEIP DWNQKIYSGD FLSITKWLKE NVHQYGATLK PTELIKKITG
EELSAKYFIE YLNDKFGKLY GV
|
|---|
| |