| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2611 |
|---|
| Symbol | |
|---|
| ID | 7259613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2809726 |
|---|
| End bp | 2810397 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643562526 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_002459073 |
|---|
| Protein GI | 219668638 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000000000894277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAAGGC AGCAAATCCT CTCATCTATA GAAACTTCAC CACTTCTGCA GGGTTGTGGC
ATCGATCCTG GGCTGATGTT GGTGCACCGT TATCGGGGAG GTCAGATCGT CAGCGACCGT
CCCGCAGGCA TTACTTCCGT GGGTTTGGTG GTTGAGGGGA TCGTGGATGT CTATTCTGTA
GCCCTGGACG GGCGGGACGT ACAGCTTAAC GCTTTGGAAG CGGGGGATTG CTTCGGCATT
TGCAATCTCC TTGCCCTGGC GGAGATGGAG ACGGTTCTCC GCTGCCGCAC GGACACAACG
CTGATTTTTA TTCCCAAACA AGTGCTGGTA TCCGTAATGG AGAAGGACCC GGCTTTTGCC
CTGCGCTATG CCGCCCTCTG CAACCGGAAA ATCCAGTTCC TGATCCGGCG CATTGAGATG
CTGACCATCC AATCCTGCCG CGGCAAAGTG ATCGGGTATC TTCTGTCCCA GCAAGACAAG
GCAGGAAGAG TCATACCGGA CTGCTCCCGG GAAGACCTGG CCCGCCGTCT GGATGTGAGC
CGGGCAGCCC TTTTCCGGGA GTTGGCCTTC CTGCAATCCC AAGGCCTTTT AGCCTTGGTG
GACAAGGAAA TCGTGATTGT GGATCAAGCC GGTCTGGAAC ACATCCTGTA CCAGCCTTCC
GGCTCCAAAT AA
|
|---|
| Protein sequence | MTRQQILSSI ETSPLLQGCG IDPGLMLVHR YRGGQIVSDR PAGITSVGLV VEGIVDVYSV
ALDGRDVQLN ALEAGDCFGI CNLLALAEME TVLRCRTDTT LIFIPKQVLV SVMEKDPAFA
LRYAALCNRK IQFLIRRIEM LTIQSCRGKV IGYLLSQQDK AGRVIPDCSR EDLARRLDVS
RAALFRELAF LQSQGLLALV DKEIVIVDQA GLEHILYQPS GSK
|
|---|
| |