Gene Dhaf_2487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2487 
Symbol 
ID7259458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2685979 
End bp2687037 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content53% 
IMG OID643562373 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002458951 
Protein GI219668516 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAA TTGCAGTATT GCCCGGCGAT GGCATCGGGC AGGAAATTAT TCCCCAGGCC 
GTACGGGTGC TGAAAGCAGT CTTGGCTGAA ACGGATGCTG AATTTGAGTT TCAGGACTAT 
CCCATAGGGG GAGCGGCCAT CGAATTGGTG GGGAAAGCCT TGCCGGATGA GACCTTGCAG 
GGTTGCCGGG AAGCTGACGC GGTTCTGTTA GGTGCCGTAG GGGGACATCA ATGGGATCAT 
CTCCCTGCCT CGGAACGTCC GGAAACAGCG GCTCTTTTAG GCCTGCGCAA AGGGCTGAAC 
TTCTATGCCA ATATCCGCCC TGTGCGCATG ATTCCCAGCC TGTTGGCCAC TTCTACCCTT 
AAAGAGAACG TGCTGGACGG GGTGGATATG GTGGTTATCC GGGAATTGAC CGGAGGGGTT 
TATTTCGGGG AAAAAGGCCG TTCAGATAAC CCTCGTTCAG CATACGATAA GATGACCTAT 
TCAGAAGAAG AGATTCGGCG CATCCTGATC CAAGGCTTTG AGACAGCTAT GCTCCGCAGC 
AAAAAGCTTT GCTCCGTGGA TAAGGCCAAT GTTCTGGAAA CCTCCCGCCT TTGGAGAGAG 
ATAGCCAATG AATTAGCTAA AGAGTATCCT GAAGTGGAGC TCACGCATAT GTATGTGGAT 
AATGCGGCCA TGCAATTGGT CCGCAACCCC AAGCAATTCG ATGTCATCGT CACGGAGAAC 
ATGTTCGGGG ATATTCTCAC CGATCTGGCC TCCATGTTGG GCGGCTCCAT CGGTATGCTC 
TCCTCAGCAA GCTTGAGCGG CACCCAGGGG ATGTATGAAC CGGCTCATGG TTCTGCCCCC 
GATATCGCCG GTAAGAACCT GGCTAATCCT CTGGCCACTA TTCTTTCCGC AGCTTTGATG 
CTTCGCTATT CTTTTGGTAT GGAGGCCGAA GCATTACGCA TTGAGAGCGC TGTGGAAAAG 
GTCCTGGAGC AAGGGTATCG GACTGGGGAT CTGGCCCAGG CAGGGGATAA GGTTGTGGGA 
ACGATAGAGA TGGGCGATGC AGTGCTGGCT GCACTGTAA
 
Protein sequence
MPKIAVLPGD GIGQEIIPQA VRVLKAVLAE TDAEFEFQDY PIGGAAIELV GKALPDETLQ 
GCREADAVLL GAVGGHQWDH LPASERPETA ALLGLRKGLN FYANIRPVRM IPSLLATSTL 
KENVLDGVDM VVIRELTGGV YFGEKGRSDN PRSAYDKMTY SEEEIRRILI QGFETAMLRS 
KKLCSVDKAN VLETSRLWRE IANELAKEYP EVELTHMYVD NAAMQLVRNP KQFDVIVTEN 
MFGDILTDLA SMLGGSIGML SSASLSGTQG MYEPAHGSAP DIAGKNLANP LATILSAALM 
LRYSFGMEAE ALRIESAVEK VLEQGYRTGD LAQAGDKVVG TIEMGDAVLA AL