Gene Dhaf_2471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2471 
Symbol 
ID7259442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2669702 
End bp2670358 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content48% 
IMG OID643562357 
Productsporulation protein YtaF 
Protein accessionYP_002458935 
Protein GI219668500 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00000000193176 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGCTG CAATACTCTT CGCTATAGCC TTAAGTTTTG ACGGATTTGG CGTAGGGGTA 
TCTTATGGAA TACGGAGAAT CCGCATACCC CTTCTTTCGA TGTTGATCAT AACTCTTTGT 
ACAGTAGTAG CCATGGGAAC AGCACTGTTC TTTGGCGATG TCCTCATAGG GGTTATTACA 
GTTGTCTCGC CTAATCTTAT CGCAGCGGGA ATTTTACTCA CCTTAGGGGG CTATCAGCTG 
ATCAAGGCTA TTCCCCACTT GTTTAAAAAA GAGACGCCAA AGGCTGAGCC TGCCAGCACA 
ATAGCTGTTC GGGAGCCGGT CCTTAAGCTG GAATTCAAAA TCCTGGGCGT TGTGGTGCAG 
GTTCTCAAAA CTCCGGAACA GGCCGATCTT GATGGCTCCG GTGTGATCAG TGCCAAGGAA 
AGTGTGCTGC TGGGCACGGC CTTATCCCTG GATGCCTTTG CTTCCGGTCT GGTATTGGGT 
CTTGCTGTGG GAATCTTTAA CTCTTTGTCG GTTATTGCCT GGGTGGCCTT GATGCAAATT 
TTTATGATCA AATGTGGTCA GGCTTTAGCA GGCAGACTTC CCGAAGAGTA TTTAGGGAAA 
TTGGGCCTTT TGCCGGGAAC CATGCTTATT CTCATCGCTT TGGGAAAGCT GATTTGA
 
Protein sequence
MGAAILFAIA LSFDGFGVGV SYGIRRIRIP LLSMLIITLC TVVAMGTALF FGDVLIGVIT 
VVSPNLIAAG ILLTLGGYQL IKAIPHLFKK ETPKAEPAST IAVREPVLKL EFKILGVVVQ 
VLKTPEQADL DGSGVISAKE SVLLGTALSL DAFASGLVLG LAVGIFNSLS VIAWVALMQI 
FMIKCGQALA GRLPEEYLGK LGLLPGTMLI LIALGKLI