| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2457 |
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| Symbol | |
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| ID | 7259428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2653360 |
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| End bp | 2654310 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 643562343 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002458921 |
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| Protein GI | 219668486 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000947302 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATG GTAATATTTC ACCCCATTTG TTTCGGGTGG TGTTTGAGAA CAGTCCGATC
GGGCTGGTTG TTGTGAACGA AGATACATCT TTAAAAAGGA TTAATAACTA TATGCTTGCA
ACCTTCAATA TTGACCCCCA GGACTTTCAT GAGCGCATGC TCGGTAACGC ATTCCAATGT
TCTGATATAT ATTTGACCGG GAAAAGCTGT GGCGAGGGCG GCCATTGCCA TGATTGCGGC
CTGCGCAAAG TTCTCAGTAC GGCCATGCTG GAAGGCGCCA ACATCCTGGA AACGGTTGTC
GAACACGATT TCATAATTGA TGGGACCAAT CGGAAGAAGT GGTTTAAGGT AAGCGCATCA
CGTGTTGAAA CAGATGATGA AGTGCTTGGC ATACTGTCTT TCGTAGATAT CACAACCCAA
ATGGAATATG AGGAATTGCT CAAAAACCTG CTTTCGCTGG ATGCTGCGAC AGGAGCAATG
AATAAATATG CTCTTATTAA CTCACTAAAG AATCTCACCA CCGGAAAGGA AGGTCTGACA
GTGGCCATGA TCGACATTGA CGATTTTAAA TTAGTAAATG ATCGGTATGG TCACTTGACA
GGGGACAGGG TTCTCAACCT GTTCTGCTCC GTGGCCTTCA CAAACACACG CAAACAGGAC
ATTGTAGGAA GGTTTGGCGG TGAAGAGTTT ATGCTGATCT TTCCTGATAT GGTTTCCCGG
CTTGTAATCA AAGCTCTGCA GCGAATTTCA ACCTCATTTC GCACTGCCTG TATGAACGAA
CTCGGCTTTT CACCTACATT CAGCGTGGGA GTCGCAGAGT TTTCAACTAA AAAAATGGCC
GGAATGACTA TCGATGCTAT TATTGCTGAA GCAGATGAAA ACCTATACGC TTCAAAGAAC
GCAGGGAAAA ACAGAGTCAC AGCCTTCGGG AGCAGCCAGG TTTTCAAGTG A
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| Protein sequence | MLNGNISPHL FRVVFENSPI GLVVVNEDTS LKRINNYMLA TFNIDPQDFH ERMLGNAFQC
SDIYLTGKSC GEGGHCHDCG LRKVLSTAML EGANILETVV EHDFIIDGTN RKKWFKVSAS
RVETDDEVLG ILSFVDITTQ MEYEELLKNL LSLDAATGAM NKYALINSLK NLTTGKEGLT
VAMIDIDDFK LVNDRYGHLT GDRVLNLFCS VAFTNTRKQD IVGRFGGEEF MLIFPDMVSR
LVIKALQRIS TSFRTACMNE LGFSPTFSVG VAEFSTKKMA GMTIDAIIAE ADENLYASKN
AGKNRVTAFG SSQVFK
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