Gene Dhaf_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2000 
Symbol 
ID7258969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2153042 
End bp2153623 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content48% 
IMG OID643561893 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002458473 
Protein GI219668038 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGAGAT TTTCTGATAC GGAAAAAGAA ATGATCAAAG AAAAGCTTTT GAGGGAAGGA 
GAAAGGCTGT TTGTTGCTCA TGGGGTGAAG AAAGTGACGG TGGATGATTT AGTCCAGGCG 
GCTGGGATTG CCAAAGGTTC CTTTTACGCT TTTTACACCA ATAAAGAACA TTTATATATG 
GATATTATTG AACAGTGTCA GATGAAGCTA TGGCAGGAAC TGGACGATTT TTTGGCAGAC 
CATAAGGATC TTCGGCCCCA GGAGCTGACG AAGCGGTCTT TTGGCCGGAT GCTCGAGGGA 
GTGAAGGAGT ATCCCATACT GGTTAAAACG GATTCTGCTG TCATGAGTTA TTTGCAGCGC 
AAGCTGCCCC AGGATGTGCT GGACGCCCAT GGGTTTGAGG ACAGCAAAGC ACTGGTCAAA 
TTGCAGGAAT ACGGGGTTCG GTTTGCTTAT GAACTTCCCG TGGTGGCTAA GGCGCTTCAG 
GCCTTATATG TGGCAATTGC CTATCTGCAG CAGGAAGAAG CGGACCATGC TGTGGTCGTA 
AACCTGCTGC TGGATAGCCT GATTGAACAG ATTGTGAGGT AA
 
Protein sequence
MPRFSDTEKE MIKEKLLREG ERLFVAHGVK KVTVDDLVQA AGIAKGSFYA FYTNKEHLYM 
DIIEQCQMKL WQELDDFLAD HKDLRPQELT KRSFGRMLEG VKEYPILVKT DSAVMSYLQR 
KLPQDVLDAH GFEDSKALVK LQEYGVRFAY ELPVVAKALQ ALYVAIAYLQ QEEADHAVVV 
NLLLDSLIEQ IVR