Gene Dhaf_1956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1956 
Symbol 
ID7258925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2103824 
End bp2106397 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content54% 
IMG OID643561852 
Productmolybdopterin oxidoreductase 
Protein accessionYP_002458432 
Protein GI219667997 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID[TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGA TCGATCGAAT CACCAATGCT AAATTAAGTC GACGCTCCTT CATTTTAGCC 
AGTGCCGCCG CCACCGCCGG CCTGTCTCTT ACCGGCTGCG GCAGCAGCTT AACCCAGGCC
ACAGCCGATC AAGCCGCCGG CAAAGAAGGC AAATGGATCA CCGCCGCCTG CTGGCATAAC
TGCGGCGGGC GATGTCTTAA CAAGGCCTAT GTGGTGGATG GGGTGGTCAT CCGGCAAAAA
ACCGACGACA CCCACCCGGA CAGCCCGGAC TATCCGCAAC AACGGGCCTG CGTGCGGGGA
CGCTCCCAAC GGCAGCAAGT CTTTGGCGCC GATCGCTTAA AATACCCGAT GAAGAGAAAA
AACTGGGAAC CGGGCGGGGG CAAGAAAGAG CTCCGGGGCC GGGATGAATG GGTGAGAATC
TCCTGGGATG AAGCCCTGGA CTCCATCGCC GGCGAAATTA AACGCATCAA GTCCGAACAA
GGCAATCGTG CTTTCTTTGC CGACGGCGGC CCCGCTGCCA AAGTTCTGGC CCTCTATGGC
GGCTATGTAG CCAATTGGGG GACAACTTCA CTGGGTTCAT GGACTTATAC CCCGGGTCCC
GTCGGTTTCA GCTCCTCCAG CGGTGACAGC ATCAATGACA GGCTGGATAT GCGCAATTGT
GACACGGTGA TTATGTTCAA TATGAATCCT GCCTGGAGCT CCGCCGGTAA TCCGGTCTAT
CATTTCCTTC AGGTTAAAAA AGCCGGAGCC GATTTTATCG CCATTGATCC CTTTTATAAT
GATTCCTACG GCCTGCTGGA AGCCGATTGG ATTCCCACCC GGCCGGCTAC GGATACAGCT
CTGATGATTG GGGTGGCCCA CACCTTAATC GTCGAGGATG ATCCCGTCAA AAACCCCTTA
ATCGACTGGG ATTTCCTCAA AAAATATACC ATAGGCTTTG ACGCCGACTC CATGCCCCCG
GGCACCGATG CCAAGGACAA CTTCAAAGAC TATGTTCTCG GCACCTATGA CGGTGTCCCC
AAAAATGCGG AATGGGCTGC CGAAATCAGC GGCGTCGCCC CGGACAGAAT CCGCTATCTG
GCCCGGGCCA TGAACAAAAA CAAAAAAGTA GCCCTTCTCT ATGCCTGGTC TGCCGGAAGA
ACACAAAATG CCGACAACTT GCCGCAAATG GCGATGATTC TCGGGGCCAT GACAGGCCAT
ATGGGGAAAT CAGGGCATAT GTGCGGAGTG AGCTGCCACA GCGGTGCCGC TAACGGCGGG
GATACCTTAG TATCTCCGGG TAAAAACGGC CTGCCTACTG TAGACAATCC TGTCAAAGAC
AGTATCAACC ATACCGAAAT GTGGCGGGCC ATCGTCGATG GCAAATACAA TTTTACAGGC
AACAAAAAAT TCCTGAAGGG CGAAATGAGA GATATCGATA TCCGCCTCAT CTACCATGAT
AATAATGCCC GGCTCCAATC TGCCGACGGC ATGACCAAAG GGATCGAAGC TCACCGCAAA
GTGGATTTGG TCGTCAGTCA CGGTCAGTTC CTCACCACTA ACGCCAAGTA TTCCGATTTT
GTCCTCCCCG TCACCACGGA ATGGGAAAAA ATCGGCGGTT TTTTGACCGG TAATCGTGAA
ATGTTGATCA TGTATTCCCA AATTACCGAG CCTCTCTACG AGGCCCAAAG TGATGAATGG
ATTGCCAGAG AACTGGCCAA ACGCCTGGGT GTAGATGCTT CTAAAGCCTT TCCCATCGAC
GCCAAGCAGC AGTTCTTCAA CCAAATCGCC GGCAGCACCG TCATTTTGCC CGATGGTAAA
ACGGCCGCTC CCCTTGTCAC CATTACGGCA GAAGACATTG CCCAGTGGGG TGTCCAGGGC
AAACCACAGC AAGGCCAGAT CAGCCTCAAG GAATTCCAGG AAAAAGGACT CTATCAGATT
GAGCGAAAAC CGGGAGATAA CTACGGCTAC ATCGCCTTTA AGGATTTCTG CGACGATCCC
GAGGCCAATC CCCGTCCTTC CGCCAGCGGT AAATTCGAAT TCTACTCACA GGTATTGGCC
GACACGGTCA ATGCTATGGG CTATAGTGAG ATCAAGCCCA TACCCACTCA TATTCCCCCT
GTGGAAGGCT ATGAGGCAAC CTTTAAAGAC TGGCAGGGCA AAATCAAAGG CGACTATCCT
TACCAGGTGA TCAATCCCCA CTACCTCCGC CGCTCCCACA CCGTCTTCGA TAATGTGCAG
TGGCTCAGAG AAACCTGGCC CAATCCGGTC TACATCAGCA CCCAGGATGC CAAGGAAAAA
GGGCTTGCCG ATGGGGATAC GGTCTTACTA ACCAGCCAGC ACGGCAAAAC CCTGCGCACC
GCCTGCCTTA CCGATCGCTT TATGCCCGGC GTCATTGGTC TGCCCCATGG CTCCTGGGTC
GATATGGATG AAAAAACCGG CATCGATACC GGAGGAGCGG ACAATATTCT CTGCGGACCG
GTCTCCACCG GCCAAGGGGT CTCCGGCTGG AACAGCTGCG TCTGCAATAT GGAGAAATAT
TCCGGCGCCT CCCTAATCGC CGATGTGCAA AAACCCCAGC GGATTATTCT CTAA
 
Protein sequence
MDLIDRITNA KLSRRSFILA SAAATAGLSL TGCGSSLTQA TADQAAGKEG KWITAACWHN 
CGGRCLNKAY VVDGVVIRQK TDDTHPDSPD YPQQRACVRG RSQRQQVFGA DRLKYPMKRK
NWEPGGGKKE LRGRDEWVRI SWDEALDSIA GEIKRIKSEQ GNRAFFADGG PAAKVLALYG
GYVANWGTTS LGSWTYTPGP VGFSSSSGDS INDRLDMRNC DTVIMFNMNP AWSSAGNPVY
HFLQVKKAGA DFIAIDPFYN DSYGLLEADW IPTRPATDTA LMIGVAHTLI VEDDPVKNPL
IDWDFLKKYT IGFDADSMPP GTDAKDNFKD YVLGTYDGVP KNAEWAAEIS GVAPDRIRYL
ARAMNKNKKV ALLYAWSAGR TQNADNLPQM AMILGAMTGH MGKSGHMCGV SCHSGAANGG
DTLVSPGKNG LPTVDNPVKD SINHTEMWRA IVDGKYNFTG NKKFLKGEMR DIDIRLIYHD
NNARLQSADG MTKGIEAHRK VDLVVSHGQF LTTNAKYSDF VLPVTTEWEK IGGFLTGNRE
MLIMYSQITE PLYEAQSDEW IARELAKRLG VDASKAFPID AKQQFFNQIA GSTVILPDGK
TAAPLVTITA EDIAQWGVQG KPQQGQISLK EFQEKGLYQI ERKPGDNYGY IAFKDFCDDP
EANPRPSASG KFEFYSQVLA DTVNAMGYSE IKPIPTHIPP VEGYEATFKD WQGKIKGDYP
YQVINPHYLR RSHTVFDNVQ WLRETWPNPV YISTQDAKEK GLADGDTVLL TSQHGKTLRT
ACLTDRFMPG VIGLPHGSWV DMDEKTGIDT GGADNILCGP VSTGQGVSGW NSCVCNMEKY
SGASLIADVQ KPQRIIL