Gene Dhaf_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1924 
Symbol 
ID7258893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2060961 
End bp2061293 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content52% 
IMG OID643561820 
Productalkylhydroperoxidase like protein, AhpD family 
Protein accessionYP_002458400 
Protein GI219667965 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCT ATTACAATTC TGCTGATCTG GCCAAATTTG CCACCATGGG TGAGGAAGCA 
CCGGACCTTT GGCAGAAATT CATGGCCTAT TACGGTTCGG TATTTGAGGA AGGTGCCCTG
AGCCCGCGGG AAAAAGCCTT GATTGCTTTG GCAGTGGCCA CCGCCGTGCA ATGTCCCTAT
TGCATCGAAG CTTATACCCA GAGCTCTTTG GAAAAGGGCG CCAACGAGGA ACAGATGACG
GAAGCGATCC ATGTGGCCTG TGCCATTCGC GGCGGGGCCT CTCTTGTGCA CGGCGTCCAA
ATGAAAAATA TCGTGAAGAA AATTGGATTC TAG
 
Protein sequence
MDTYYNSADL AKFATMGEEA PDLWQKFMAY YGSVFEEGAL SPREKALIAL AVATAVQCPY 
CIEAYTQSSL EKGANEEQMT EAIHVACAIR GGASLVHGVQ MKNIVKKIGF