Gene Dhaf_1862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1862 
Symbol 
ID7258831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1989241 
End bp1990092 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content54% 
IMG OID643561759 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002458339 
Protein GI219667904 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGAATG AAACAGTTAC AATCAAGAGG CCTTTAATCA ATCGCCGCAC CTGGACTTTA 
ACCATTATCA CGTCGGCAGT GCTGATACTG GTGGGGATAG CGGCAGCGGG CGTTCTCATG
TCGCCGGAGG CCTATGCCAC TAATTTTGAA AACAAAAATC AGCCGCCCTC CTTCTCCCAT
CTGTTCGGTA CGGACTGGAT GGGGCGGGAT ATGCTGGCCC GTACTGTCAA AGGACTTTCC
ACCAGTATTC TGATCGGTGT CTTAGCGGCA GGCATCAGTT CTGTGATTGC GGTCATTTTG
GGCACCCTCT CGGCAGTGAT GGGGAAAAAA GCGGATCAAG TGGTCTTATG GCTGATTGAT
ATGGTGCAGG GCATTCCTCA CCTGATTCTG CTGATGCTCA TCTCTTTTAT GCTGGGCAAG
GGGCTGCAGG GGGTTATGAT CGGCATCGCC ATCACCCATT GGCCTAATTT GGCCCGTATC
GTCCGGGCCG AGGTTTTGGC GGTAAAGAAT GGGCAGTTTG TCCAGGCATC CCGCAGGATG
GGGCGCAGCC CCATGTTTAT TGCCGTGGGG CATATCCTGC CCCATGTGCT TCCTCAGTAT
ATCGTCGGAC TTATTTTATT GTTCCCCCAT GCCATTTTGC ACGAGGCTTC CATCACCTTT
CTGGGTTTTG GACTGTCTCC GGAAGAGCCG GCGGTGGGCG TCATTTTATC TGAATCCATG
CGCTATCTGA CTTCCGGGGT TTGGTGGCTT ACGGTACTGC CCGGTGCGGC TCTCCTGGCC
ATTGTGCTGT TATTCGATGC CATCGGGGAC AATCTGCGGA CGATTATCGA TCCCTACAGC
GCACAGGAAT AG
 
Protein sequence
MVNETVTIKR PLINRRTWTL TIITSAVLIL VGIAAAGVLM SPEAYATNFE NKNQPPSFSH 
LFGTDWMGRD MLARTVKGLS TSILIGVLAA GISSVIAVIL GTLSAVMGKK ADQVVLWLID
MVQGIPHLIL LMLISFMLGK GLQGVMIGIA ITHWPNLARI VRAEVLAVKN GQFVQASRRM
GRSPMFIAVG HILPHVLPQY IVGLILLFPH AILHEASITF LGFGLSPEEP AVGVILSESM
RYLTSGVWWL TVLPGAALLA IVLLFDAIGD NLRTIIDPYS AQE