Gene Dhaf_1861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1861 
Symbol 
ID7258830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp1988262 
End bp1989251 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content54% 
IMG OID643561758 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002458338 
Protein GI219667903 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA GCATAGCAAA AATGATCGGG GTGAGCTTTT TACGAGGGAT TACTTTGCTG 
GTTGCAGTGG TCATTGTTAC CTTTTTGCTG GCAGACGCAT CCCCCATTGA TCCTATCAGT 
GCTTATGTGG GATCAGAAAG TGCGATCAGT GAAGAGCAAC GAGAGGCGAT TGCCCGGTAT 
TGGGGCCTTG ACCAGCCTCC GGCAGGCCGT CTGGTAAGCT GGCTTAAAGC CTTGGCCCAG 
GGTGACATGG GGAAATCCTA CTATTTTCAG CAGCCGGTGA CGGCGGTGAT CGGAGAGCGT 
TTTACCCAAT CCCTGATGCT GATGGGGGTT GCCTGGGTGC TCTCTGGCAT TTTCGGCTTT 
TTGCTGGGTG TCATTGCCGC TGCCTGCCGC CATAATCCGA TTGATAAAGG GATCAAAACC 
GTGTGTTTAT TAATGTCTTC CAGTCCGCCC TTTTGGCTGG GGCTGCTGCT GATGATGGTC 
TTTGCGGTGA AGCTGGGCTG GTTTCCCCTG GGGCTTTCGG CCCCCATCGG CAAGCTGGCC 
AGCGAGGTGA CCATCTGGGA GCGGCTTCAT CATCTGGTTT TGCCGGCGGT GACACTTTCG 
ATCACCGGTG TGTCCGGTAT TGCCCTGCAC ACCCGGCAGA AGCTGATTGA CATTTTGGAA 
AGCGACTTTA TGCTTTTCGC CCAAGCGAGA GGGGAGGGGA AATGGCAGGC CATACGCCGT 
CATGGGTTCC GCAATATTCT TTTGCCGGCG GTGACTTTGC AGTTTGCGGC CATCAGTGAG 
CTGTTCGGCG GCTCGGTGCT GGCAGAAAAC GTTTTTTCCT ACACCGGTCT GGGGCAAGCG 
GCGGTGTTGG CAGGAACCCA CGGGGATACG CCGCTGCTGA TGGGAATCGC GTTGTTCAGC 
GCATTGTTTG TATTTTGCGG GAATATGATT GCCAATCTCC TTTATCCGGT GATCGACCCT 
CAAATCAGGG AGGCAGCTCA TGGTGAATGA
 
Protein sequence
MNKSIAKMIG VSFLRGITLL VAVVIVTFLL ADASPIDPIS AYVGSESAIS EEQREAIARY 
WGLDQPPAGR LVSWLKALAQ GDMGKSYYFQ QPVTAVIGER FTQSLMLMGV AWVLSGIFGF 
LLGVIAAACR HNPIDKGIKT VCLLMSSSPP FWLGLLLMMV FAVKLGWFPL GLSAPIGKLA 
SEVTIWERLH HLVLPAVTLS ITGVSGIALH TRQKLIDILE SDFMLFAQAR GEGKWQAIRR 
HGFRNILLPA VTLQFAAISE LFGGSVLAEN VFSYTGLGQA AVLAGTHGDT PLLMGIALFS 
ALFVFCGNMI ANLLYPVIDP QIREAAHGE